EBG00000313325 - n.727T>C
Drug resistance types
33 Sensitive
2 RR-TB
2 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| 3 | |
| lineage1.1.3.2 | 2 |
| La1.2.BCG | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1.2 | 1 |
| lineage3 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.8 | 3 |
| lineage4.9 | 33 |
| lineage4.6 | 2 |
| lineage4.9;lineage2.2 | 1 |
| La1.8.1 | 2 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303931 | Other | lineage2.2.1 | None | SRR5485517 | MDR-TB | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR4817421 | Other | La1.2.BCG | gb | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4812963 | MDR-TB | lineage4.3.3 | None | SRR8380864 | Other | lineage2.2.1.2 | None | ERR2510483 | MDR-TB | lineage3 | pk | ERR2510478 | Pre-XDR-TB | lineage3 | pk | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820845 | MDR-TB | lineage4.8 | None | ERR4819653 | Sensitive | lineage2.2.1 | gb | ERR2747620 | Sensitive | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR6045162 | Sensitive | lineage4.9 | None | ERR4831631 | HR-TB | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR5162127 | Sensitive | lineage4.9 | None | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | ERR5162126 | Sensitive | lineage4.9 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR3439281 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439225 | Other | La1.8.1 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR9117806 | Other | lineage4.8 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR9119591 | MDR-TB | lineage4.6 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR15368973 | Other | None |
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