lineage | Count |
---|---|
lineage4.4.2 | 1 |
lineage4.9 | 7 |
lineage4 | 1 |
lineage4.4.1.1 | 2 |
lineage4.8 | 3 |
lineage4.3.4 | 1 |
lineage3 | 7 |
lineage2.2.1 | 7 |
lineage1.2.2.2 | 1 |
lineage4.1.2 | 1 |
lineage4.3.3 | 4 |
lineage4.3.2.1 | 1 |
lineage4.2.2 | 1 |
lineage1.2.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1.3.1 | 1 |
lineage3.1 | 2 |
lineage4.1.2.1 | 1 |
lineage3.1.3 | 1 |
lineage3.1.2 | 2 |
lineage4.6.2.2 | 2 |
lineage1.1.3.3 | 1 |
lineage3.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.6.5 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796557 | Other | lineage4 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR6197022 | Other | lineage4.9 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR18912070 | Sensitive | lineage4.8 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR6046641 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6046246 | Other | lineage3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045178 | Other | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7131004 | Other | lineage4.6.2.2 | None |
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