EBG00000313339 - n.1018delC
Drug resistance types
4 Sensitive
4 RR-TB
3 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.1 | 2 |
| lineage3 | 9 |
| lineage2.2.1 | 9 |
| lineage4.1.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.4.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR6046246 | Other | lineage3 | None | SRR7070329 | Other | lineage3 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6044904 | Other | lineage3 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR1180252 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR18213736 | Other | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR6046273 | Other | lineage3.1.2 | None |
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