EBG00000313339 - n.2125T>C
Drug resistance types
9 Sensitive
2 RR-TB
3 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage2.2.1 | 5 |
| lineage4.8 | 3 |
| lineage4.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 15 |
| lineage1.1.3.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 3 |
| lineage4 | 1 |
| La1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage6 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21728339 | Other | lineage3 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR2229358 | Other | lineage4.8 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769482 | Sensitive | La1 | None | ERR6197032 | Other | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10482948 | Other | La1.8.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR11972229 | MDR-TB | lineage2.2.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR13583312 | HR-TB | lineage4.1.2.1 | None | SRR1792232 | Other | La1.7.1 | None |
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