lineage | Count |
---|---|
lineage4.8;lineage4.3.3 | 4 |
lineage4.9 | 13 |
2 | |
lineage3 | 3 |
lineage4.4.2 | 2 |
lineage2.2.1 | 18 |
lineage2.2.2 | 3 |
La1.7.1 | 2 |
lineage4.8 | 3 |
lineage1.2.1.1 | 1 |
lineage4 | 2 |
lineage4.9;lineage3.1.1 | 1 |
lineage3.1.3 | 1 |
lineage3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.2 | 1 |
lineage4.2.1.1 | 1 |
La1.8.1 | 3 |
lineage5.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.5 | 1 |
lineage4.7 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675265 | Other | lineage4 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR1023509 | Other | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046376 | Other | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR21798501 | Sensitive | lineage4.5 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None |
---|