EBG00000313339 - n.773C>A
Drug resistance types
4 Sensitive
0 RR-TB
11 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| La1;lineage4.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4.9 | 11 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| 1 | |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage5.2 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None |
|---|
