Rv0006 - c.669T>C


Drug resistance types
40 Sensitive 0 RR-TB 5 HR-TB 5 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 39 Other
lineage Counts
lineage Count
M.canetti 55
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.9 6
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2 2
La1.7;M.canetti;lineage4.9 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2.1 1
La1.7;lineage4.9 3
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 89
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR24061599 Sensitive M.canetti None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR313116 Sensitive M.canetti None
SRR16058668 Sensitive M.canetti None
ERR4815361 Other M.canetti None
SRR6650709 Sensitive M.canetti None
SRR10177261 Sensitive M.canetti None
ERR3597002 Other M.canetti None
ERR552307 Sensitive M.canetti None
SRR6046593 Other lineage4.9 None
ERR313115 Other M.canetti None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR266106 Sensitive M.canetti None
SRR18289196 Sensitive M.canetti None
ERR266120 Sensitive M.canetti None
ERR4816019 Sensitive M.canetti None
ERR266109 Sensitive M.canetti None
SRR10177258 Other M.canetti None
SRR5818661 Other M.canetti dj
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR24061598 Sensitive M.canetti None
SRR10177260 Other M.canetti None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR28170812 Sensitive M.canetti None
SRR5818605 Other M.canetti None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR10177262 Sensitive M.canetti None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4817181 Sensitive M.canetti None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR313114 Sensitive M.canetti None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR266123 Sensitive M.canetti None
ERR4819927 Sensitive M.canetti None
SRR3675222 Other La1.7 None
ERR4821046 Sensitive M.canetti None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR13285068 Sensitive lineage4.9 None
ERR551056 Sensitive M.canetti None
ERR266110 Other M.canetti None
ERR313113 Other M.canetti None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9125480 Sensitive M.canetti None
ERR313117 Other M.canetti None
SRR5818652 Sensitive M.canetti dj
SRR16058674 Other M.canetti None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR10177263 Sensitive M.canetti None
ERR552305 Sensitive M.canetti None
SRR5818676 Other M.canetti dj
SRR22251329 Other lineage2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR3597003 Sensitive M.canetti None
SRR22179528 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
ERR3597005 Sensitive M.canetti None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR3597001 Sensitive M.canetti None
SRR3675385 Other La1.7;lineage4.9 None
ERR552304 Sensitive M.canetti None
SRR5818567 Other M.canetti dj
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR266107 Other M.canetti None
SRR3675501 Other La1.7;lineage4.9 None
ERR551055 Sensitive M.canetti None
SRR5818614 Sensitive M.canetti dj
SRR20969731 Other lineage2.2.1 None
ERR266108 Sensitive M.canetti None
SRR10177259 Other M.canetti None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR551057 Other M.canetti None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR5818653 Sensitive M.canetti dj
ERR3597007 Sensitive M.canetti None
ERR9125475 Other M.canetti None
ERR7451301 Sensitive M.canetti None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None