Rv0006 - c.669T>C
Drug resistance types
40 Sensitive
0 RR-TB
5 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 55 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage2.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.9 | 6 |
| lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR10177262 | Sensitive | M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | SRR5818567 | Other | M.canetti | dj | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | SRR5818614 | Sensitive | M.canetti | dj | SRR20969708 | HR-TB | lineage2.2 | None | ERR4815361 | Other | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR551056 | Sensitive | M.canetti | None | ERR266108 | Sensitive | M.canetti | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR552307 | Sensitive | M.canetti | None | ERR313115 | Other | M.canetti | None | ERR4769450 | Other | lineage4.9 | None | ERR551057 | Other | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR266110 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3597002 | Other | M.canetti | None | SRR6046593 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR5818653 | Sensitive | M.canetti | dj | ERR4816019 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR4769452 | Other | lineage4.9 | None | SRR10177260 | Other | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR266123 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR266107 | Other | M.canetti | None | SRR20969731 | Other | lineage2.2.1 | None | SRR10177259 | Other | M.canetti | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR266106 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | ERR9125475 | Other | M.canetti | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
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