lineage | Count |
---|---|
10 | |
lineage3 | 3 |
lineage4 | 3 |
lineage4.8 | 5 |
lineage4;lineage2 | 1 |
lineage4.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.9 | 14 |
lineage1.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2.1 | 3 |
lineage4.3.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.7 | 1 |
La1.8.1 | 2 |
lineage4.9;La1.3 | 1 |
lineage1.1.2 | 1 |
lineage4.6.5 | 1 |
lineage4.1.4 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815310 | Other | None | ERR4815079 | RR-TB | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815556 | RR-TB | lineage3 | None | ERR1750907 | RR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816756 | RR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6896288 | RR-TB | lineage4.3.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4796577 | MDR-TB | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR3468502 | Other | La1.8.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9030356 | MDR-TB | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR1173310 | MDR-TB | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140736 | RR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16134504 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156775 | Other | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None |
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