Rv0668 - c.-405T>C
Drug resistance types
39 Sensitive
7 RR-TB
58 HR-TB
44 MDR-TB
35 Pre-XDR-TB
1 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage5.1.1 | 2 |
| lineage4.3.3 | 6 |
| lineage2.2.1 | 38 |
| lineage4.4.2 | 5 |
| lineage2.2 | 23 |
| lineage4.3.2 | 3 |
| lineage2.2.2 | 19 |
| lineage3 | 22 |
| 12 | |
| lineage2.2.1.1 | 2 |
| lineage4 | 8 |
| lineage4.9 | 22 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;lineage2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage1.1.2 | 9 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | ERR9119098 | Sensitive | lineage4.3.3 | None | ERR9120012 | MDR-TB | lineage4.3.2 | None | ERR9120013 | MDR-TB | lineage4.3.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1013617 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048982 | HR-TB | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048983 | HR-TB | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049041 | MDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049027 | Pre-XDR-TB | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172066 | Sensitive | lineage4.9 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1172840 | Sensitive | lineage1.1.2 | None | SRR1173183 | Sensitive | lineage1.1.2 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1172943 | HR-TB | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173720 | Other | lineage4.9 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1175132 | HR-TB | lineage3 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR12006056 | Sensitive | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR3105762 | HR-TB | None | SRR19303931 | Other | lineage2.2.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | ERR2446544 | Sensitive | lineage3 | nl | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR3275548 | Sensitive | lineage3 | nl | SAMN02598990 | Sensitive | lineage1.1.2 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SRR3732654 | RR-TB | lineage4 | None | ERR4817292 | Sensitive | lineage4.3.4.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR2517457 | Sensitive | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4829238 | Sensitive | lineage3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2747607 | Sensitive | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046834 | Sensitive | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797141 | Sensitive | lineage3 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None |
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