Rv0668 - c.-405T>C


Drug resistance types
39 Sensitive 7 RR-TB 58 HR-TB 44 MDR-TB 35 Pre-XDR-TB 1 XDR-TB 13 Other
lineage Counts
lineage Count
lineage5.1.1 2
lineage4.3.3 6
lineage2.2.1 38
lineage4.4.2 5
lineage2.2 23
lineage4.3.2 3
lineage2.2.2 19
lineage3 22
12
lineage2.2.1.1 2
lineage4 8
lineage4.9 22
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.5 3
lineage4.9;lineage2 1
lineage4.9;lineage2.2.1 1
lineage1.1.2 9
lineage4.9;lineage4.2.1 1
lineage1.2.2.2 3
lineage4.4.1.2 1
lineage4.4.1.1 1
lineage4.1.2.1 2
lineage4.3.4.2.1 2
lineage4.6.3 1
lineage6.3.1 1
lineage4.8.2 1
lineage4.2.2.2 1
lineage4.6.1 1
lineage4.2.1 1
lineage4.9;lineage1.1 1
lineage4.9;La1.3 1
spoligotype Counts
spoligotype Count
None 197
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR751330 MDR-TB lineage5.1.1 None
ERR9119101 Sensitive lineage4.3.3 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
ERR9119098 Sensitive lineage4.3.3 None
ERR9120012 MDR-TB lineage4.3.2 None
ERR9120013 MDR-TB lineage4.3.2 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013596 HR-TB lineage3 None
SRR1013584 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013598 HR-TB None
SRR1013597 HR-TB lineage2.2 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013599 HR-TB None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013610 HR-TB lineage4 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013608 HR-TB lineage2.2 None
SRR1013611 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013614 HR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013612 HR-TB lineage4 None
SRR1013618 MDR-TB None
SRR1013617 MDR-TB None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1013634 MDR-TB lineage2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048885 MDR-TB None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048982 HR-TB None
SRR1048980 HR-TB lineage3 None
SRR1048988 HR-TB lineage2.2 None
SRR1048983 HR-TB None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048995 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048994 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049041 MDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049027 Pre-XDR-TB None
SRR11342667 MDR-TB lineage4.3.3 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1169591 Sensitive lineage1.1.2 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1166181 MDR-TB lineage4 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1172798 Sensitive lineage2.2.1 None
SRR1172066 Sensitive lineage4.9 None
SRR1172710 Sensitive lineage1.2.2.2 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1172840 Sensitive lineage1.1.2 None
SRR1173183 Sensitive lineage1.1.2 None
SRR1172873 MDR-TB lineage1.1.2 None
SRR1172943 HR-TB lineage3 None
SRR1172938 MDR-TB lineage3 None
SRR1173014 MDR-TB lineage3 None
SRR1173656 Sensitive lineage1.1.2 None
SRR1173416 Other lineage4.9 None
SRR1173621 MDR-TB lineage3 None
SRR1175165 Sensitive lineage2.2.1 None
SRR1173727 MDR-TB lineage3 None
SRR1175131 Sensitive lineage2.2.1 None
SRR1173686 MDR-TB lineage3 None
SRR1173720 Other lineage4.9 None
SRR1175096 Sensitive lineage1.2.2.2 None
SRR1175132 HR-TB lineage3 None
SRR1175151 MDR-TB lineage3 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR12006056 Sensitive lineage4.9 None
SRR17567930 Other lineage4.4.1.1 None
SRR3105762 HR-TB None
SRR19303931 Other lineage2.2.1 None
SAMN02599090 MDR-TB lineage3 None
SAMN02599094 Sensitive lineage1.1.2 None
ERR2446544 Sensitive lineage3 nl
SAMN02360583 HR-TB lineage2.2.2 None
ERR2027233 RR-TB lineage4.1.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR3275548 Sensitive lineage3 nl
SAMN02598990 Sensitive lineage1.1.2 None
SAMN02599067 Sensitive lineage2.2.1 None
ERR1034791 RR-TB None
SRR3732654 RR-TB lineage4 None
ERR4817292 Sensitive lineage4.3.4.2.1 None
SRR3742667 Sensitive lineage4.9 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02599089 MDR-TB lineage3 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02599072 Sensitive lineage2.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR2446413 Sensitive lineage4.6.3 None
ERR4818440 Other lineage6.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR4819430 Sensitive lineage4.1.2.1 None
SAMN02599179 MDR-TB lineage1.1.2 None
SAMN02360577 HR-TB lineage3 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR4820394 Other lineage4.3.4.2.1 None
SAMN02599061 MDR-TB lineage3 None
SAMN02360585 HR-TB lineage4.5 None
SAMN02599068 Sensitive lineage1.2.2.2 None
ERR2517457 Sensitive lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR4829238 Sensitive lineage3 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR2747607 Sensitive lineage4.9 None
SRR6046291 Other lineage3 None
SRR6046609 Sensitive lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
ERR3078008 MDR-TB lineage4.6.1 None
ERR323057 Sensitive lineage4.9 None
ERR323035 Sensitive lineage4.9 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6896576 Other lineage2.2.1 None
SRR7131160 Sensitive lineage3 None
SRR7755706 MDR-TB lineage4.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796594 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR5908229 Sensitive lineage4.3.3 None
ERR3797084 Sensitive lineage4.9 None
ERR473311 Sensitive lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR5908213 Sensitive lineage4.3.3 None
ERR3283049 Sensitive lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4797141 Sensitive lineage3 None
ERR5987249 MDR-TB lineage4.3.2 None