lineage | Count |
---|---|
lineage4 | 38 |
lineage2.2.1 | 5 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.9 | 7 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
24 | |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.4.1.2 | 1 |
lineage2.2 | 2 |
La1 | 1 |
La1.8.1 | 2 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675246 | Sensitive | lineage4 | None | ERR8025748 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807020 | Pre-XDR-TB | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045010 | Other | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034652 | Other | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283010 | Other | La1 | None | ERR3797015 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4024991 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736848 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1173777 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR14801749 | Sensitive | None |
---|