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SRA data
Rv1979c
- c.-50A>C
Drug resistance types
144 Sensitive
12 RR-TB
156 HR-TB
205 MDR-TB
42 Pre-XDR-TB
1 XDR-TB
15 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4
547
lineage4.1.2.1
5
lineage2.2;lineage4
5
lineage4.3.4.2
5
lineage2.2.1;lineage4
5
lineage4.1.1
2
lineage4.3.3
2
lineage4.1.1.3
1
lineage4.1.2.1;lineage4.3.3
1
lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
575
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034720
MDR-TB
lineage4
pe
ERR1034730
HR-TB
lineage4
pe
ERR1034737
MDR-TB
lineage4
pe
ERR1034740
MDR-TB
lineage4
pe
ERR1034741
HR-TB
lineage4.1.1.3
pe
ERR1034755
MDR-TB
lineage4
pe
ERR1034756
HR-TB
lineage4
pe
ERR1034792
HR-TB
lineage4
pe
ERR11049742
Sensitive
lineage4
None
ERR11049750
Sensitive
lineage4
None
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