lineage | Count |
---|---|
47 | |
lineage2.2.1.2 | 2 |
lineage4.5 | 1 |
lineage2 | 2 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2 | 3 |
lineage4.9 | 2 |
lineage4.1.3 | 2 |
lineage4;lineage3.1 | 1 |
lineage4.1.2.1 | 2 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR1173629 | Other | None | SRR12142341 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675221 | HR-TB | None | ERR212034 | HR-TB | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR6046066 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341418 | Other | None | SRR6045526 | HR-TB | None | SRR6045327 | HR-TB | None | SRR3675574 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4820651 | Sensitive | lineage1.2.2.2 | None | SRR6044790 | HR-TB | None | SRR6046225 | HR-TB | None | ERR4830353 | Other | None | ERR502532 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR3283027 | HR-TB | None | ERR067681 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR502889 | Other | None | SRR7496517 | Other | None | ERR3283036 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR3797069 | Other | None | ERR4407463 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR736839 | Other | None | ERR9786843 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None |
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