lineage | Count |
---|---|
67 | |
lineage4 | 18 |
lineage3.1 | 2 |
lineage4.1.2.1 | 3 |
lineage4.9 | 12 |
La1.2 | 1 |
lineage2.2 | 2 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage2.2.2 | 1 |
lineage3 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.1 | 2 |
lineage3;lineage2.1 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | ERR323038 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR3283017 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1035122 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798099 | Other | None | ERR4811493 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR702406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119669 | HR-TB | None | SRR14801749 | Sensitive | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR1180996 | HR-TB | lineage4 | None | SRR14782405 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR6325445 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | SRR5341300 | Other | lineage4 | None | ERR4818722 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341453 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR6045010 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046492 | Other | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None |
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