lineage | Count |
---|---|
46 | |
lineage4 | 16 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 2 |
lineage4.9 | 5 |
lineage3 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.1 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769450 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797264 | Sensitive | None | ERR6866022 | Other | None | ERR4797474 | Other | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866639 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR17658565 | Other | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR3675234 | Other | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR8025618 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341453 | Sensitive | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | SRR5341330 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | SRR5341467 | Other | lineage4 | None | ERR2693231 | Other | None | SRR6044890 | Other | lineage4.9 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | ERR5162046 | Other | La1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | SRR6046492 | Other | None | ERR1035122 | Sensitive | None | ERR3283028 | Other | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797064 | Sensitive | None | ERR4024991 | Other | None |
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