Rv2752c - c.576C>T
Drug resistance types
58 Sensitive
6 RR-TB
42 HR-TB
56 MDR-TB
53 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 185 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage4.6.2.2 | 1 |
| 6 | |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 6 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La3;lineage2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1 | 4 |
| lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 78 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26399738 | HR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR11828965 | MDR-TB | lineage2.1 | None | SRR5067642 | Sensitive | lineage2.1 | vn | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR5709934 | Pre-XDR-TB | lineage2.1 | th | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR11662474 | MDR-TB | lineage2.1 | None | SRR21690953 | Sensitive | lineage2.1 | None | ERR11081260 | Sensitive | lineage2.1 | None | SRR26399879 | Other | lineage2.1 | None | SRR5067550 | Other | lineage2.1 | vn | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26937143 | MDR-TB | lineage2.1 | None | SRR1710063 | Sensitive | lineage2.1 | cn | SRR11828983 | Pre-XDR-TB | lineage2.1 | th | ERR4831637 | MDR-TB | lineage2.1 | vn | ERR9786645 | Other | lineage4.6.2.2 | None | SRR5065294 | Sensitive | lineage2.1 | vn | SRR5709872 | Pre-XDR-TB | lineage2.1 | th | ERR4832052 | HR-TB | lineage2.1 | vn | SRR5073995 | Sensitive | lineage2.1 | vn | SRR5074174 | Other | lineage2.1 | vn | ERR234216 | Sensitive | lineage2.1 | None | SRR28409607 | Sensitive | lineage2.1 | None | SRR28170771 | Sensitive | lineage2.1 | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR26399167 | HR-TB | lineage2.1 | None | SRR5074136 | Sensitive | lineage2.1 | vn | SRR5837708 | Pre-XDR-TB | lineage2.1 | th | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR26399621 | Sensitive | lineage2.1 | None | SRR5067580 | Sensitive | lineage2.1 | vn | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR24799276 | Sensitive | lineage2.1 | None | ERR7911277 | MDR-TB | lineage2.1 | vn | SRR11828989 | Pre-XDR-TB | lineage2.1 | th | SRR10828200 | Pre-XDR-TB | lineage2.1 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10341349 | Pre-XDR-TB | lineage2.1 | None | ERR7911475 | RR-TB | lineage2.1 | vn | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR8237298 | Sensitive | lineage2.1 | ch | SRR22249862 | Sensitive | lineage2.1 | None | SRR5073902 | Other | lineage2.1 | vn | ERR2843486 | HR-TB | lineage2.1 | None | SRR10809073 | Sensitive | lineage2.1 | None | SRR10040392 | Pre-XDR-TB | lineage2.1 | None | ERR8773618 | MDR-TB | lineage2.1 | None | SRR11828975 | Pre-XDR-TB | lineage2.1 | th | SRR26399189 | Sensitive | lineage2.1 | None | SRR8237361 | Sensitive | lineage2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR12072598 | Pre-XDR-TB | lineage2.1 | None | SRR11828990 | Pre-XDR-TB | lineage2.1 | None | SRR11715722 | Pre-XDR-TB | lineage2.1 | None | ERR3275732 | Sensitive | lineage2.1 | nl | SRR11662627 | MDR-TB | lineage2.1 | None | SRR14520114 | Sensitive | lineage2.1 | None | SRR5073656 | Sensitive | lineage2.1 | vn | SRR5067683 | HR-TB | lineage2.1 | vn | SRR10394883 | Pre-XDR-TB | lineage2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR25207056 | Pre-XDR-TB | lineage2.1 | None | SRR7069733 | Sensitive | lineage2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR22250136 | Other | lineage2.1 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR5073637 | HR-TB | lineage2.1 | vn | SRR5067408 | HR-TB | lineage2.1 | vn | SRR10341352 | Pre-XDR-TB | lineage2.1 | None | SRR11662669 | MDR-TB | lineage2.1 | None | SRR12072599 | Pre-XDR-TB | lineage2.1 | None | ERR4831730 | HR-TB | lineage2.1 | vn | SRR5065563 | Sensitive | lineage2.1 | vn | SRR5074054 | HR-TB | lineage2.1 | vn | ERR7911125 | RR-TB | lineage2.1 | vn | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR8237370 | Sensitive | lineage2.1 | None | SRR5065617 | Sensitive | lineage2.1 | vn | SRR14519949 | Other | lineage2.1 | None | ERR9119371 | Sensitive | lineage2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5073921 | Sensitive | lineage2.1 | vn | SRR5073739 | HR-TB | lineage2.1 | vn | SRR22249713 | HR-TB | lineage2.1 | None | SRR18913794 | Sensitive | lineage2.1 | None | SRR26936969 | MDR-TB | lineage2.1 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR10341347 | Pre-XDR-TB | lineage2.1 | None | SRR5709899 | Pre-XDR-TB | lineage2.1 | th | SRR3205959 | Pre-XDR-TB | lineage2.1 | None | ERR9119231 | HR-TB | lineage2.1 | None | SRR3205958 | Pre-XDR-TB | lineage2.1 | None | SRR5817473 | MDR-TB | lineage2.1 | au | SRR21732823 | Sensitive | lineage2.1 | None | ERR9786671 | Other | None | ERR9786604 | Other | None | SRR28409308 | Sensitive | lineage2.1 | None | ERR4817862 | HR-TB | lineage2.1 | gb | ERR4828566 | HR-TB | lineage2.1 | vn | ERR4830363 | HR-TB | lineage2.1 | vn | ERR4830397 | HR-TB | lineage2.1 | vn | ERR4828640 | HR-TB | lineage2.1 | vn | SRR5065418 | Sensitive | lineage2.1 | vn | SRR5067713 | Sensitive | lineage2.1 | vn | SRR26937132 | RR-TB | lineage2.1 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12072597 | Pre-XDR-TB | lineage2.1 | None | ERR7737924 | MDR-TB | lineage2.1 | None | SRR11662502 | MDR-TB | lineage2.1 | None | SRR14519956 | Other | lineage2.1 | None | SRR5114022 | Pre-XDR-TB | lineage2.1 | None | ERR4831605 | MDR-TB | lineage2.1 | vn | SRR16100725 | Sensitive | lineage2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3273198 | MDR-TB | lineage2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR5073838 | Sensitive | lineage2.1 | vn | ERR4830412 | HR-TB | lineage2.1 | vn | ERR9119439 | HR-TB | lineage2.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR11662498 | Pre-XDR-TB | lineage2.1 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4832040 | HR-TB | lineage2.1 | None | ERR4830275 | Sensitive | lineage2.1 | vn | SRR10828181 | MDR-TB | lineage2.1;lineage2.2.1 | None | SRR5114021 | Pre-XDR-TB | lineage2.1 | None | SRR10828191 | Pre-XDR-TB | lineage2.1 | None | ERR775787 | Sensitive | lineage2.1 | th | SRR10828183 | Pre-XDR-TB | lineage2.1 | None | DRR185119 | Sensitive | lineage2.1 | vn | ERR270697 | HR-TB | lineage2.1 | None | SRR10341351 | MDR-TB | lineage2.1;lineage2.2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR10341353 | Pre-XDR-TB | lineage2.1 | None | SRR5065619 | Other | lineage2.1 | vn | SRR21689528 | Other | lineage2.1 | None | SRR11828982 | Pre-XDR-TB | lineage2.1 | th | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR26159043 | Other | lineage4.9 | None | SRR5065487 | Sensitive | lineage2.1 | vn | SRR11828987 | Pre-XDR-TB | lineage2.1 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969753 | Sensitive | lineage2.1;lineage2.2.1 | None | SRR5114020 | Pre-XDR-TB | lineage2.1 | None | SRR5065411 | HR-TB | lineage2.1 | vn | ERR8773616 | MDR-TB | lineage2.1 | None | ERR775794 | MDR-TB | lineage2.1 | th | ERR9119326 | HR-TB | lineage2.1 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR7911304 | MDR-TB | lineage2.1 | vn | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR22250173 | Sensitive | lineage2.1 | None | SRR5073499 | Sensitive | lineage2.1 | vn | SRR10828203 | Pre-XDR-TB | lineage2.1 | None | SRR11715725 | Pre-XDR-TB | lineage2.1 | None | SRR26399799 | HR-TB | lineage2.1 | None | SRR26399764 | Sensitive | lineage2.1 | None | SRR5114017 | Pre-XDR-TB | lineage2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5065604 | Sensitive | lineage2.1 | vn | SRR5709887 | Pre-XDR-TB | lineage2.1 | th | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5065678 | Sensitive | lineage2.1 | vn | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR5114018 | Pre-XDR-TB | lineage2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR11828964 | MDR-TB | lineage2.1 | None | SRR5074182 | Sensitive | lineage2.1 | vn | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR7911509 | MDR-TB | lineage2.1 | vn | SRR1640750 | RR-TB | None | SRR25827682 | Other | None | SRR5065441 | Sensitive | lineage2.1 | vn | SRR11828973 | Pre-XDR-TB | lineage2.1 | th | SRR1710062 | Other | lineage2.1 | cn | SRR26399765 | Sensitive | lineage2.1 | None | SRR22251890 | Sensitive | lineage2.1 | None | SRR5067475 | Sensitive | lineage2.1 | vn | SRR16100240 | Sensitive | lineage2.1 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5067285 | Sensitive | lineage2.1 | vn | SRR26937040 | MDR-TB | lineage2.1 | None | SRR5067461 | HR-TB | lineage2.1 | vn | DRR184642 | Sensitive | lineage2.1 | vn | SRR5067554 | Other | lineage2.1 | vn | SRR11715724 | Pre-XDR-TB | lineage2.1 | None | ERR4830396 | MDR-TB | lineage2.1 | vn | SRR10394882 | Pre-XDR-TB | lineage2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR921502 | Pre-XDR-TB | lineage2.1;lineage2.2.1 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | SRR5065278 | Sensitive | lineage2.1 | vn | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR5709762 | Pre-XDR-TB | lineage2.1 | th | SRR11715720 | Pre-XDR-TB | lineage2.1 | None | SRR12072600 | Pre-XDR-TB | lineage2.1 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR10828193 | Pre-XDR-TB | lineage2.1 | None | SRR5073866 | Sensitive | lineage2.1 | vn | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR8774471 | Other | lineage2.1 | None | ERR4828364 | HR-TB | lineage2.1 | None | SRR10828184 | Pre-XDR-TB | lineage2.1 | None | DRR261132 | HR-TB | lineage2.1 | None | ERR7737678 | MDR-TB | lineage2.1 | None | SRR5073883 | Sensitive | lineage2.1 | vn | ERR025881 | Sensitive | lineage2.1 | None | ERR4828247 | HR-TB | lineage2.1 | vn | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR26399473 | Sensitive | lineage2.1 | None | SRR10809026 | MDR-TB | lineage2.1 | None | SRR5709764 | Pre-XDR-TB | lineage2.1 | th | SRR5114019 | Pre-XDR-TB | lineage2.1 | None | SRR11828988 | Pre-XDR-TB | lineage2.1 | None | SRR5710027 | Pre-XDR-TB | lineage2.1 | th | SRR11662223 | MDR-TB | lineage2.1 | None | SRR11662296 | MDR-TB | lineage2.1 | None | SRR6325456 | Other | lineage2.1 | us | SRR11828976 | Pre-XDR-TB | lineage2.1 | th | SRR26399834 | HR-TB | lineage2.1 | None | ERR2513708 | Sensitive | lineage2.1 | None | SRR20969515 | HR-TB | lineage2.1 | None | SRR13180316 | HR-TB | lineage2.1 | None | SRR26399309 | MDR-TB | lineage2.1 | None | ERR9119325 | MDR-TB | lineage2.1 | None | SRR5709798 | Pre-XDR-TB | lineage2.1 | th | SRR26399175 | HR-TB | lineage2.1 | None | SRR11662162 | Pre-XDR-TB | lineage2.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
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