lineage | Count |
---|---|
53 | |
lineage4.1.2.1 | 4 |
lineage5.2 | 2 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage4 | 1 |
lineage4.9 | 9 |
La1.8.1 | 1 |
lineage4.3.2 | 1 |
lineage2.2.1 | 3 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR5311081 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR3283017 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283024 | Other | None | ERR4188350 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | None | ERR736835 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675234 | Other | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR2693239 | HR-TB | None | ERR2693231 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4821053 | Other | lineage3 | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None |
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