Rv3793 - c.-891C>G
Drug resistance types
74 Sensitive
4 RR-TB
26 HR-TB
28 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 82 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 10 |
| lineage2.2.1;lineage4.3;lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 9 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 4 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1;lineage4.8 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage3 | 1 |
| lineage4.5;lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1465858 | Sensitive | lineage4.8 | None | ERR4819519 | Sensitive | lineage4.8 | gb | SRR29273757 | RR-TB | lineage4.8 | None | SRR22048388 | Sensitive | lineage4.8 | None | SRR22048484 | Sensitive | lineage4.8 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR227989 | Sensitive | lineage2.2.1;lineage4.3;lineage4.8 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR11044580 | Sensitive | lineage4.8 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11068018 | Sensitive | lineage4.8 | None | SRR6832032 | HR-TB | lineage4.8 | None | ERR2446451 | Sensitive | lineage4.8 | nl | SRR21690258 | Sensitive | lineage4.8 | None | SRR24710078 | Sensitive | lineage4.8 | None | SRR2100718 | Sensitive | lineage4.8 | None | SRR19304109 | Sensitive | lineage4.8 | None | ERR552335 | Sensitive | lineage4.8 | de | ERR11049548 | Sensitive | lineage4.8 | None | ERR11044389 | Sensitive | lineage4.8 | None | ERR228047 | Sensitive | lineage4.8 | ru | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4818696 | Sensitive | lineage4.8 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11043528 | MDR-TB | lineage4.8 | None | SRR19303985 | Sensitive | lineage4.8 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14782831 | Sensitive | lineage4.8 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR3275851 | Sensitive | lineage4.8 | nl | SRR23862035 | Other | lineage4.8 | None | SRR1181304 | Sensitive | lineage4.8 | None | SRR21690266 | Sensitive | lineage4.8 | None | SAMEA4041338 | Sensitive | lineage4.8 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR229948 | Sensitive | lineage4.8 | ru | SRR6831740 | Sensitive | lineage4.8 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1181046 | Sensitive | lineage4.8 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | ERR1465851 | Sensitive | lineage4.8 | None | SRR7069075 | Sensitive | lineage4.8 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR24256083 | HR-TB | lineage4.8 | None | ERR11044784 | Sensitive | lineage4.8 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR19304099 | Sensitive | lineage4.8 | None | ERR5917767 | Sensitive | lineage4.8 | by | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR11082242 | Sensitive | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR551873 | Sensitive | lineage4.8 | de | ERR4829291 | Sensitive | lineage4.8 | None | ERR3275455 | Sensitive | lineage4.8 | nl | ERR1465858_ERR1465975 | Sensitive | lineage4.8 | None | ERR230094 | Sensitive | lineage4.8 | None | ERR4815091 | Sensitive | lineage4.8 | None | ERR2517247 | Sensitive | lineage4.8 | nl | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR18213898 | Sensitive | lineage4.8 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6832601 | Sensitive | lineage4.8 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR550845 | Sensitive | lineage4.8 | de | ERR4831194 | Sensitive | lineage4.8 | de | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1465971 | Sensitive | lineage4.8 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4822108 | Sensitive | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4817665 | Other | lineage4.8 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR228000 | Sensitive | lineage4.8 | ru | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR16088492 | Sensitive | lineage4.8 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11049527 | Sensitive | lineage4.8 | None | SRR1159052 | Sensitive | lineage4.8 | None | ERR13285134 | MDR-TB | lineage4.8 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR11050024 | Sensitive | lineage4.8 | None | SRR29127019 | Sensitive | lineage4.8 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR22048531 | Sensitive | lineage4.8 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2027294 | Sensitive | lineage4.8 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR18715131 | Sensitive | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR7131101 | Sensitive | lineage4.8 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR2514411 | Sensitive | lineage4.8 | gb | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11068350 | HR-TB | lineage4.1.2.1;lineage4.8 | None | ERR11044340 | Sensitive | lineage4.8 | None | ERR1465975 | Sensitive | lineage4.8 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21690910 | Sensitive | lineage4.8 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4819470 | Sensitive | lineage4.8 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR551420 | Sensitive | lineage4.8 | de | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4830157 | HR-TB | lineage4.5;lineage4.8 | None | SAMN02419537 | Sensitive | lineage4.8 | by | ERR11044583 | Sensitive | lineage4.8 | None | SRR19303912 | Sensitive | lineage4.8 | None | ERR4831371 | Sensitive | lineage4.8 | de | SRR29053477 | Sensitive | lineage4.8 | None | SRR29050859 | Other | lineage4.9 | None | SAMEA4041345 | Sensitive | lineage4.8 | None | ERR3275903 | Sensitive | lineage4.8 | nl | SRR21658547 | Sensitive | lineage4.8 | None | ERR4816193 | Sensitive | lineage4.8 | gb | SRR7070631 | Sensitive | lineage4.8 | None | SRR19304007 | Sensitive | lineage4.8 | None | ERR1465851_ERR1465971 | Sensitive | lineage4.8 | None | SRR7131214 | Sensitive | lineage4.8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR19303815 | Other | lineage4.8 | None |
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