lineage | Count |
---|---|
lineage2.2.2 | 1 |
lineage4.1 | 1 |
lineage4.9 | 4 |
lineage6.3;lineage2.2.1 | 1 |
63 | |
lineage2.2.1 | 3 |
lineage4;lineage1.1.2 | 1 |
lineage3.1 | 2 |
lineage4.1.2.1 | 2 |
lineage2 | 2 |
lineage4.1.3 | 2 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR8025719 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR3675465 | HR-TB | None | SRR6325445 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR3675486 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR161033 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045952 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797069 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4188350 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5336148 | Other | None | ERR6336796 | MDR-TB | lineage1.2.1.2 | None | ERR6358991 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR8976043 | HR-TB | None | ERR736839 | Other | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1640750 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None |
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