EBG00000313339 - n.2929C>T
Drug resistance types
0 Sensitive
9 RR-TB
2 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage2.2.1 | 6 |
| lineage4.9 | 11 |
| La1.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage3.1.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4821143 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1184329 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | SRR11342646 | HR-TB | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None |
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