Rv0005 - c.990G>A


Drug resistance types
6 Sensitive 0 RR-TB 13 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
lineage4.9 12
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4 1
lineage4.6.1.1 2
lineage2.2.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.9;lineage6.3 1
1
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.9 2
La1.2;La1.8.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 41
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769452 Other lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6045053 Other lineage4 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR20969731 Other lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
ERR3283018 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2446566 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR212001 HR-TB None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None