Rv0006 - c.427_429delAGGinsCT


Drug resistance types
20 Sensitive 5 RR-TB 42 HR-TB 15 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 100 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 10
lineage2.1;lineage4.9;lineage6.3 6
La1;lineage4.1.2 1
lineage4.9;lineage7 3
La1.7;lineage4.9 5
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.9 61
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
La3;lineage4 1
13
lineage4.6.1.1 2
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9;lineage7 1
La2;lineage2.2 1
La3;lineage4.9 11
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4 2
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.1 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.4.1.1 1
lineage4.3.2 1
lineage1.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 2
lineage4.8.1 1
lineage2.1 1
lineage4.9;lineage6.3 4
lineage4.1.1.2 1
La3;lineage2.1;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
La1.7.1 1
La3;M.canetti;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage4.5 1
La1;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La1.8.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage5.2 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.7 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage2.2 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 183
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4796929 Sensitive lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
ERR736856 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR7496509 Other None
SRR8692887 Other None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR926156 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063883 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR926159 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1165628 Other La3;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR26159035 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675572 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR7496517 Other None
SRR3675236 Other None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3797087 Sensitive lineage4.9 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR363499 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11466044 Other lineage4.1.1.3 None
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR3797073 Other La1.8.1 None
ERR3797064 Other La3;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR473332 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675311 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045503 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
SRR1184381 MDR-TB None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR6358979 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR926160 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR10809074 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None