Rv0006 - c.474C>A
Drug resistance types
13 Sensitive
3 RR-TB
16 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| 4 | |
| lineage4.9 | 29 |
| lineage4.9;lineage6.3 | 5 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.4.2 | 1 |
| La3 | 2 |
| lineage2.2.1 | 2 |
| La3;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.1 | 2 |
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9 | 5 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR29096900 | Sensitive | lineage4.3.4.2 | None | SRR1165699 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR29539432 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172817 | Other | La3 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173633 | Other | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1173384 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None |
|---|
