lineage | Count |
---|---|
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
59 | |
lineage4 | 31 |
lineage4.9 | 6 |
lineage2.2.1 | 3 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage1.1.3.1 | 1 |
lineage2.2.1.2 | 2 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 111 |
ID | Drug resistance | Lineage | Country iso2 | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SRR3742665 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR6045526 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR6045450 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6046046 | Other | None | SRR6045399 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR4830353 | Other | None | SRR6511621 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4024991 | Other | None | ERR3797036 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4769521 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1180996 | HR-TB | lineage4 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR14782405 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None |
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