Rv0668 - c.3919C>T


Drug resistance types
5 Sensitive 3 RR-TB 16 HR-TB 16 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 27 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3 3
lineage1;lineage4.9 1
lineage4.9 6
lineage4.1.2.1 2
lineage3.1 11
lineage4.1.2 1
lineage2.1 3
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.8.1 1
lineage4.9;lineage6.3 3
2
M.canetti;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1;lineage6.3 1
lineage4.9;lineage7 1
La3 1
La1.7;lineage4.9 1
lineage2.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9;lineage7 2
lineage2.2.1;lineage3 1
La1.7.1;La1.7.X-unk4 1
lineage4.1.1.1 1
La1.7.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1 2
La3;lineage2 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 69
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR031465 MDR-TB lineage3.1 None
ERR4818347 Other lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4553455 MDR-TB lineage3.1 None
SRR16058589 Other La1.8.1 None
ERR234111 MDR-TB lineage3.1 np
SRR28119717 Other lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR1063858 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR2100324 MDR-TB lineage3.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1184294 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4830073 Sensitive lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR114476 MDR-TB lineage3.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28046024 Other lineage3.1 None
ERR4821076 Sensitive lineage3.1 gb
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4553836 MDR-TB lineage3.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR702406 Other lineage2.1 None
ERR551397 Sensitive lineage3.1 de
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2513554 Sensitive lineage3.1 gb
ERR4798579 Sensitive lineage3.1 in