lineage | Count |
---|---|
lineage4.1.2.1 | 2 |
lineage4.9 | 11 |
lineage2.2 | 2 |
M.canetti;lineage2.2 | 2 |
lineage4.9;lineage6.1.3 | 1 |
lineage1.1.3.1 | 5 |
lineage4.6.3;lineage4.9 | 1 |
La3 | 2 |
lineage4.9;lineage7 | 3 |
lineage2.2.1.2;lineage7 | 1 |
lineage2.2.1.2 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 36 |
ID | Drug resistance | Lineage | Country iso2 | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6797649 | Other | lineage1.1.3.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821658 | Other | La3 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR017782 | Other | La3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR5535933 | Other | lineage4.9 | None | SRR6797493 | Other | lineage1.1.3.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR29050770 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4829026 | Sensitive | lineage1.1.3.1 | it | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR12882406 | HR-TB | lineage1.1.3.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR9217365 | Sensitive | lineage1.1.3.1 | None | ERR4769452 | Other | lineage4.9 | None |
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