lineage | Count |
---|---|
lineage4.5 | 1 |
lineage4.9 | 4 |
49 | |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage2.1 | 1 |
lineage4 | 8 |
lineage4.1.1 | 1 |
lineage3 | 1 |
lineage4.1.2.1 | 2 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | SRR13423544 | Other | lineage4.5 | None | SRR1175508 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675545 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176651 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR278594 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311081 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323045 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3468544 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR8976043 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR702406 | HR-TB | None | ERR9119669 | HR-TB | None |
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