lineage | Count |
---|---|
lineage2.2 | 4 |
67 | |
La1 | 2 |
lineage4.9 | 4 |
lineage4 | 2 |
lineage3 | 1 |
lineage2.2.1.1 | 2 |
lineage6.3;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283010 | Other | La1 | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3439432 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR4769521 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4811022 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR6866410 | Sensitive | None | ERR4811142 | MDR-TB | None | ERR736839 | Other | None | ERR736835 | HR-TB | None | ERR8976043 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1173778 | Other | None | ERR9119669 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR12142341 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675234 | Other | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | ERR212123 | Other | None | ERR1035162 | Other | None | SRR3675571 | HR-TB | None | SRR5341418 | Other | None | ERR234659 | HR-TB | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR2693227 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None |
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