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SRA data
Rv3423c
- c.1191T>G
Drug resistance types
0 Sensitive
0 RR-TB
19 HR-TB
14 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
La3;M.canetti;lineage2.1;lineage4.9
8
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
3
La1.7;lineage4.9
2
M.canetti;lineage2.2.2;lineage6.2
2
La3;M.canetti;lineage3.1
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
1
La2;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
39
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR126608
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126618
MDR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
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