Rv3696c - p.Thr178Ser
Drug resistance types
0 Sensitive
1 RR-TB
33 HR-TB
22 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9 | 9 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 8 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| 1 | |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La1.7.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage1.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR987722 | MDR-TB | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None |
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