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SRA data
Rv3794
- c.1146G>A
Drug resistance types
4 Sensitive
3 RR-TB
38 HR-TB
22 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
15 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
20
5
M.canetti;lineage2.1;lineage4.9;lineage6.3
5
lineage2.1;lineage4.9
5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
lineage4.8
4
lineage2.1;lineage4.9;lineage6.3
3
lineage4.9
3
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.2
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
84
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11050290
Sensitive
lineage4.8
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
ERR176658
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR176766
HR-TB
lineage2.1;lineage4.9
None
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