Rv3919c - c.-11C>T


Drug resistance types
425 Sensitive 4 RR-TB 76 HR-TB 102 MDR-TB 28 Pre-XDR-TB 0 XDR-TB 153 Other
lineage Counts
lineage Count
lineage4.2.1.1 760
lineage4.2.1.1;lineage2.2.1 9
lineage4.3.3;lineage4.2.1.1 3
lineage1.1.2 5
lineage4.8;lineage4.2.1.1;lineage2.2.1 1
lineage2.2.1 1
lineage4.8;lineage4.2.1.1 3
lineage4.2.1.1;lineage2.2 1
lineage4.3.4.2.1;lineage1.1.2 1
lineage4.3.3 1
lineage4.7;lineage4.2.1.1 2
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 788
Geographic prevalence
Country level data for this variant is available for 107 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7646065 Other lineage4.2.1.1 None
SRR7755696 MDR-TB lineage4.2.1.1;lineage2.2.1 None
SRR7755692 MDR-TB lineage4.2.1.1 None
SRR7755699 Sensitive lineage4.2.1.1 None
SRR7755703 HR-TB lineage4.2.1.1 None
SRR7755725 Other lineage4.3.3;lineage4.2.1.1 None
SRR7755749 Other lineage4.2.1.1 None
SRR7765355 MDR-TB lineage4.2.1.1 None
ERR4818221 HR-TB lineage4.2.1.1 gb
ERR4819757 HR-TB lineage4.2.1.1 gb
ERR028331 Sensitive lineage4.2.1.1 None
ERR4820041 HR-TB lineage4.2.1.1 gb
ERR4819085 Sensitive lineage4.2.1.1 gb
ERR2513886 Sensitive lineage4.2.1.1 gb
ERR4820178 Sensitive lineage4.2.1.1 gb
ERR4820364 HR-TB lineage4.2.1.1 gb
ERR11049095 Sensitive lineage4.2.1.1 None
ERR11798661 MDR-TB lineage4.2.1.1 None
ERR10465767 Sensitive lineage4.2.1.1 None
ERR10465848 HR-TB lineage4.2.1.1 None
ERR10465750 Sensitive lineage4.2.1.1 None
ERR10465959 Sensitive lineage4.2.1.1 None
ERR10762416 MDR-TB lineage4.2.1.1 None
ERR11043657 MDR-TB lineage4.2.1.1 None
ERR10867786 MDR-TB lineage4.2.1.1 None
ERR4821395 Sensitive lineage4.2.1.1 gb
ERR11042993 Sensitive lineage4.2.1.1 None
ERR11043789 MDR-TB lineage4.2.1.1 None
ERR11043892 Sensitive lineage4.2.1.1 None
ERR11043950 Sensitive lineage4.2.1.1 None
ERR2512792 Sensitive lineage4.2.1.1 gb
ERR11044863 Sensitive lineage4.2.1.1 None
ERR4821277 Sensitive lineage4.2.1.1 gb
ERR4820663 Sensitive lineage4.2.1.1 gb
ERR3639808 MDR-TB lineage4.2.1.1 None
ERR4821291 HR-TB lineage4.2.1.1 gb
ERR403280 HR-TB lineage4.2.1.1 None
ERR386927 Sensitive lineage1.1.2 None
ERR403251 Sensitive lineage4.2.1.1 None
ERR386954 Sensitive lineage4.2.1.1 None
ERR403319 Sensitive lineage4.2.1.1 None
ERR403299 HR-TB lineage4.8;lineage4.2.1.1;lineage2.2.1 None
ERR4407488 Sensitive lineage4.2.1.1 None
ERR4132444 Sensitive lineage4.2.1.1 None
ERR2512541 HR-TB lineage4.2.1.1 gb
ERR4407489 Sensitive lineage4.2.1.1 None
ERR2514797 Sensitive lineage4.2.1.1 gb
ERR144565 HR-TB lineage4.2.1.1 ru
ERR2514974 HR-TB lineage4.2.1.1 gb
ERR2513523 Sensitive lineage4.2.1.1 gb
ERR2514120 HR-TB lineage4.2.1.1 gb
ERR11049517 Sensitive lineage4.2.1.1 None
ERR2514291 HR-TB lineage4.2.1.1 gb
ERR144569 Sensitive lineage4.2.1.1 ru
SRR16087981 Sensitive lineage4.2.1.1 None
ERR117451 Sensitive lineage4.2.1.1 ru
ERR108456 Sensitive lineage4.2.1.1 ru
ERR133967 Sensitive lineage4.2.1.1 ru
ERR229979 Sensitive lineage4.2.1.1 ru
ERR137245 Sensitive lineage4.2.1.1 ru
ERR158582 Sensitive lineage4.2.1.1 ru
ERR229986 Sensitive lineage4.2.1.1 ru
ERR8665966 MDR-TB lineage4.2.1.1 None
ERR229919 Sensitive lineage4.2.1.1 ru
ERR11049543 Sensitive lineage4.2.1.1 None
ERR8665965 MDR-TB lineage4.2.1.1 None
ERR230002 Sensitive lineage4.2.1.1 ru
ERR227992 Sensitive lineage4.2.1.1 ru
ERR11798649 Pre-XDR-TB lineage4.2.1.1 None
SRR16088139 Sensitive lineage4.2.1.1 None
SRR16088482 Sensitive lineage4.2.1.1 None
SRR16088202 Sensitive lineage4.2.1.1 None
ERR11049597 Sensitive lineage4.2.1.1 None
ERR11049601 Sensitive lineage4.2.1.1 None
SRR16088487 Sensitive lineage4.2.1.1 None
ERR067661 HR-TB lineage4.2.1.1 ru
SRR16087878 Pre-XDR-TB lineage4.2.1.1 None
ERR137214 Sensitive lineage4.2.1.1 ru
SRR16088576 MDR-TB lineage4.2.1.1 None
ERR5864522 MDR-TB lineage4.2.1.1 None
ERR5864520 MDR-TB lineage4.2.1.1 None
ERR5864527 MDR-TB lineage4.2.1.1 None
ERR5864525 MDR-TB lineage4.2.1.1 None
ERR11049859 Sensitive lineage4.2.1.1 None
ERR5864521 MDR-TB lineage4.2.1.1 None
ERR5864524 MDR-TB lineage4.2.1.1 None
ERR5864523 MDR-TB lineage4.2.1.1 None
ERR5864526 MDR-TB lineage4.2.1.1 None
ERR5864528 MDR-TB lineage4.2.1.1 None
ERR11049852 Sensitive lineage4.2.1.1 None
ERR5865611 MDR-TB lineage4.2.1.1 None
ERR5865610 MDR-TB lineage4.2.1.1 None
ERR5865624 MDR-TB lineage4.2.1.1 None
ERR5865846 Pre-XDR-TB lineage4.2.1.1 None
ERR5865623 MDR-TB lineage4.2.1.1 None
ERR5866078 MDR-TB lineage4.2.1.1 None
ERR5866014 MDR-TB lineage4.2.1.1 None
ERR5866015 MDR-TB lineage4.2.1.1 None
ERR5866079 MDR-TB lineage4.2.1.1 None
ERR5866225 MDR-TB lineage4.2.1.1 None
ERR5866281 MDR-TB lineage4.2.1.1 None
ERR5866226 MDR-TB lineage4.2.1.1 None
ERR5866227 MDR-TB lineage4.2.1.1 None
ERR133978 Sensitive lineage4.2.1.1 ru
ERR5866282 MDR-TB lineage4.2.1.1 None
ERR5866283 MDR-TB lineage4.2.1.1 None
ERR137239 Sensitive lineage4.2.1.1 ru
ERR108509 Sensitive lineage4.2.1.1 ru
SRR16087995 HR-TB lineage4.2.1.1 None
SRR16087978 Sensitive lineage4.2.1.1 None
SRR16088310 Sensitive lineage4.2.1.1 None
SRR16088204 Sensitive lineage4.2.1.1 None
SRR16088394 Sensitive lineage4.2.1.1 None
SRR16088363 Sensitive lineage4.2.1.1 None
SRR16088405 MDR-TB lineage4.2.1.1 None
SRR16088345 MDR-TB lineage4.2.1.1 None
SRR16088379 Sensitive lineage4.2.1.1 None
SRR16088387 Sensitive lineage4.2.1.1 None
SRR16088547 Sensitive lineage4.2.1.1 None
SRR16088554 HR-TB lineage4.2.1.1 None
SRR16088197 Sensitive lineage4.2.1.1 None
SRR16088365 Sensitive lineage4.2.1.1 None
SRR22249850 Sensitive lineage4.2.1.1 None
ERR7361947 MDR-TB lineage4.2.1.1 None
SRR24222929 Sensitive lineage4.2.1.1 None
SRR24256003 MDR-TB lineage4.2.1.1 None
SRR24256365 MDR-TB lineage4.2.1.1 None
SRR24256340 MDR-TB lineage4.2.1.1 None
ERR7801186 Sensitive lineage2.2.1 None
SRR24255946 MDR-TB lineage4.2.1.1 None
SRR24256311 MDR-TB lineage4.2.1.1 None
SRR24256278 Sensitive lineage4.2.1.1 None
SRR21798453 Other lineage4.2.1.1 None
ERR11050020 MDR-TB lineage4.2.1.1 None
SRR24256333 Sensitive lineage4.2.1.1 None
SRR24466744 Other lineage4.2.1.1 None
ERR8773775 HR-TB lineage4.2.1.1 None
SRR26112087 Other lineage4.2.1.1 None
ERR8773751 Sensitive lineage4.2.1.1 None
ERR8773753 Sensitive lineage4.2.1.1 None
ERR8773777 HR-TB lineage4.2.1.1 None
ERR8773795 Sensitive lineage4.2.1.1 None
ERR8773797 Sensitive lineage4.2.1.1 None
ERR8773972 Sensitive lineage4.2.1.1 None
ERR8773881 Sensitive lineage4.2.1.1 None
ERR8773940 Sensitive lineage4.2.1.1 None
ERR8773883 Sensitive lineage4.2.1.1 None
ERR9811806 Sensitive lineage4.2.1.1 None
ERR8774374 MDR-TB lineage4.2.1.1 None
ERR8774373 MDR-TB lineage4.2.1.1 None
SRR16087911 Pre-XDR-TB lineage4.2.1.1 None
ERR9119662 Sensitive lineage4.2.1.1 None
ERR11050072 Sensitive lineage4.2.1.1 None
SRR1002683 Sensitive lineage4.2.1.1 None
SRR10379900 Other lineage4.2.1.1 None
SRR1002697 HR-TB lineage4.2.1.1 None
ERR11050197 HR-TB lineage4.2.1.1 None
SRR10379901 Other lineage4.2.1.1 None
SRR10379981 Other lineage4.2.1.1 None
SRR10379954 Other lineage4.2.1.1 None
SRR10379951 Other lineage4.2.1.1 None
SRR10380044 Other lineage4.2.1.1 None
SRR10380001 Other lineage4.2.1.1 None
SRR10380028 Other lineage4.2.1.1 None
SRR10380058 Other lineage4.2.1.1 None
SRR10380059 Other lineage4.2.1.1 None
SRR10380144 MDR-TB lineage4.2.1.1 None
SRR10380075 Other lineage4.2.1.1 None
SRR10380091 Other lineage4.2.1.1 None
SRR10380090 Other lineage4.2.1.1 None
SRR10380169 Other lineage4.2.1.1 None
SRR10380156 Other lineage4.2.1.1 None
SRR10380154 Other lineage4.2.1.1 None
SRR10380153 Other lineage4.2.1.1 None
SRR10380228 Other lineage4.2.1.1 None
SRR10380223 Sensitive lineage4.2.1.1 None
SRR10380221 Sensitive lineage4.8;lineage4.2.1.1 None
SRR10397181 MDR-TB lineage4.2.1.1 None
SRR10380251 Sensitive lineage4.2.1.1 None
SRR10380252 Sensitive lineage4.2.1.1 None
SRR11033653 Sensitive lineage4.2.1.1 None
SRR11033632 Other lineage4.2.1.1 None
SRR10397202 Sensitive lineage4.2.1.1 None
SRR11033658 HR-TB lineage4.2.1.1 None
SRR1159310 Sensitive lineage4.2.1.1 None
SRR11033764 Sensitive lineage4.2.1.1 None
SRR1162521 Sensitive lineage4.2.1.1 None
SRR1162956 Sensitive lineage4.2.1.1 None
ERR11050328 Other lineage4.2.1.1 None
SRR1163105 Sensitive lineage4.2.1.1 None
SRR1163096 Sensitive lineage4.2.1.1 None
SRR1166136 Sensitive lineage4.2.1.1 None
SRR1163102 Sensitive lineage4.2.1.1 None
SRR1163371 Sensitive lineage4.2.1.1 None
SRR1163393 Sensitive lineage4.2.1.1 None
SRR1163347 Sensitive lineage4.2.1.1 None
SRR1163422 Sensitive lineage4.2.1.1 None
SRR1168983 Sensitive lineage4.2.1.1 None
SRR1168982 Sensitive lineage4.2.1.1 None
SRR1166123 Other lineage4.2.1.1 None
SRR1166337 Other lineage4.2.1.1 None
SRR1168991 Sensitive lineage4.2.1.1 None
SRR1168988 Other lineage4.2.1.1 None
SRR1169034 Sensitive lineage4.2.1.1 None
SRR1169019 Sensitive lineage4.2.1.1 None
SRR1169097 Other lineage4.2.1.1 None
SRR1169054 Sensitive lineage4.2.1.1 None
SRR1169092 MDR-TB lineage4.2.1.1 None
SRR1169079 Sensitive lineage4.2.1.1 None
SRR1172200 Sensitive lineage4.2.1.1 None
SRR1172184 Sensitive lineage4.2.1.1 None
SRR1172224 Sensitive lineage4.2.1.1 None
SRR1172455 Sensitive lineage4.2.1.1 None
SRR1172286 Other lineage4.2.1.1 None
SRR1172298 Sensitive lineage4.2.1.1 None
SRR13232441 Sensitive lineage4.2.1.1 None
SRR1181288 Sensitive lineage4.2.1.1 None
SRR1181075 Sensitive lineage4.2.1.1 None
SRR14781868 Other lineage4.2.1.1 None
ERR11050520 HR-TB lineage4.2.1.1 None
SRR13232729 MDR-TB lineage4.3.3;lineage4.2.1.1 None
SRR14781840 Sensitive lineage4.2.1.1 None
SRR14781890 Other lineage4.2.1.1 None
SRR14781886 RR-TB lineage4.2.1.1 None
SRR14781881 Other lineage4.2.1.1 None
SRR14781895 HR-TB lineage4.2.1.1 None
SRR14781912 Other lineage4.2.1.1 None
SRR14781913 Sensitive lineage4.2.1.1 None
SRR14781908 HR-TB lineage4.2.1.1 None
SRR14781936 Other lineage4.2.1.1 None
SRR14781958 Sensitive lineage4.2.1.1 None
SRR14781953 Other lineage4.2.1.1 None
SRR14781950 Other lineage4.2.1.1 None
SRR14781985 Other lineage4.2.1.1 None
SRR14781962 Other lineage4.2.1.1 None
SRR14782021 Sensitive lineage4.2.1.1 None
SRR14782014 Other lineage4.2.1.1 None
SRR14782074 Other lineage4.2.1.1 None
SRR14782026 Other lineage4.2.1.1 None
SRR14782057 Other lineage4.2.1.1 None
SRR14782215 Other lineage4.2.1.1 None
SRR14782105 Other lineage4.2.1.1 None
SRR14782134 Other lineage4.2.1.1 None
SRR14782163 HR-TB lineage4.2.1.1 None
SRR14782172 Other lineage4.2.1.1 None
SRR14782186 HR-TB lineage4.2.1.1 None
SRR14782193 Other lineage4.2.1.1 None
SRR14782213 Other lineage4.2.1.1 None
SRR14782095 MDR-TB lineage4.2.1.1 None
SRR14782123 Other lineage4.2.1.1 None
SRR14782182 Other lineage4.2.1.1 None
SRR14782212 Other lineage4.8;lineage4.2.1.1 None
SRR14782231 Other lineage4.2.1.1 None
SRR14782262 Other lineage4.2.1.1 None
SRR14782250 Sensitive lineage4.2.1.1 None
SRR14782292 Other lineage4.2.1.1 None
SRR14782256 MDR-TB lineage4.2.1.1 None
SRR14782319 Other lineage4.2.1.1 None
SRR14782348 Other lineage4.2.1.1 None
SRR14782373 Other lineage4.2.1.1 None
SRR14782369 Other lineage4.2.1.1 None
SRR14782316 Other lineage4.2.1.1 None
SRR14782415 Other lineage4.2.1.1 None
SRR14782410 Other lineage4.2.1.1 None
SRR14782408 Sensitive lineage4.2.1.1 None
SRR14782380 Other lineage4.2.1.1 None
SRR14782477 Other lineage4.2.1.1 None
SRR14782435 Other lineage4.2.1.1 None
SRR14782450 Other lineage4.2.1.1 None
SRR14782473 Other lineage4.2.1.1 None
SRR14782488 Other lineage4.2.1.1 None
SRR14782484 Other lineage4.2.1.1 None
SRR14782533 Sensitive lineage4.2.1.1 None
SRR14782503 Other lineage4.2.1.1 None
SRR14782529 Other lineage4.2.1.1 None
SRR14782534 Other lineage4.2.1.1 None
SRR14782542 Other lineage4.2.1.1 None
SRR14782579 HR-TB lineage4.2.1.1 None
SRR14782573 Sensitive lineage4.2.1.1 None
SRR14782577 Sensitive lineage4.2.1.1 None
SRR14782653 Other lineage4.2.1.1 None
SRR14782592 HR-TB lineage4.2.1.1 None
SRR14782586 Other lineage4.2.1.1 None
SRR14782628 HR-TB lineage4.2.1.1 None
SRR14782627 Other lineage4.2.1.1 None
SRR14782647 Other lineage4.2.1.1 None
SRR14782659 HR-TB lineage4.2.1.1 None
SRR14782692 Other lineage4.2.1.1 None
SRR14782741 Other lineage4.2.1.1 None
SRR14782740 Other lineage4.2.1.1 None
SRR14782699 Sensitive lineage4.2.1.1 None
SRR14782705 Sensitive lineage4.2.1.1 None
SRR14782763 Sensitive lineage4.2.1.1 None
SRR14782795 Other lineage4.2.1.1 None
SRR14782781 Other lineage4.2.1.1 None
SRR14782787 Sensitive lineage4.2.1.1 None
SRR14782804 Other lineage4.2.1.1 None
SRR14801308 Other lineage4.2.1.1 None
SRR14782814 Sensitive lineage4.2.1.1 None
SRR14801298 Sensitive lineage4.2.1.1 None
SRR14801313 Other lineage4.2.1.1 None
SRR14801407 Sensitive lineage4.2.1.1 None
SRR14801320 Other lineage4.2.1.1 None
SRR14801321 Sensitive lineage4.2.1.1 None
SRR14801343 Other lineage4.2.1.1 None
SRR14801449 Other lineage4.2.1.1 None
SRR14801471 HR-TB lineage4.2.1.1 None
SRR14801509 Other lineage4.2.1.1 None
SRR14801508 Sensitive lineage4.2.1.1 None
SRR14801520 Other lineage4.2.1.1 None
SRR14801512 MDR-TB lineage4.2.1.1;lineage2.2.1 None
SRR14801555 Other lineage4.2.1.1 None
SRR14801529 HR-TB lineage4.2.1.1 None
SRR14801550 Sensitive lineage4.2.1.1 None
SRR14801657 Other lineage4.2.1.1 None
SRR14801660 Other lineage4.2.1.1 None
SRR14801682 Sensitive lineage4.2.1.1 None
SRR14801818 Other lineage4.2.1.1 None
SRR14801770 Sensitive lineage4.2.1.1 None
SRR14801789 Sensitive lineage4.2.1.1 None
SRR14801807 Other lineage4.2.1.1 None
SRR14801865 Other lineage4.2.1.1 None
SRR14801814 MDR-TB lineage4.2.1.1 None
SRR14801842 Other lineage4.2.1.1 None
SRR14801866 Other lineage4.2.1.1 None
SRR14801883 HR-TB lineage4.2.1.1 None
SRR14801921 Other lineage4.2.1.1 None
SRR14801897 HR-TB lineage4.2.1.1 None
SRR14801919 Sensitive lineage4.2.1.1 None
SRR14801909 Sensitive lineage4.2.1.1 None
SRR14801889 Sensitive lineage4.2.1.1 None
SRR14801917 Other lineage4.2.1.1 None
SRR14801963 Other lineage4.2.1.1 None
SRR14802083 Other lineage4.2.1.1 None
SRR14801954 Other lineage4.2.1.1 None
SRR14801965 Other lineage4.2.1.1 None
SRR14801968 Other lineage4.2.1.1 None
SRR14802026 Other lineage4.2.1.1 None
SRR14802213 MDR-TB lineage4.2.1.1 None
SRR14802205 Sensitive lineage4.2.1.1 None
SRR14802113 Other lineage4.2.1.1 None
ERR11050592 Sensitive lineage4.2.1.1 None
SRR14802201 HR-TB lineage4.2.1.1 None
SRR14802252 HR-TB lineage4.2.1.1 None
SRR14802232 Other lineage4.2.1.1 None
SRR14802250 Other lineage4.2.1.1 None
SRR14802223 Sensitive lineage4.2.1.1 None
SRR14802284 Other lineage4.2.1.1 None
SRR14802264 HR-TB lineage4.2.1.1 None
SRR14807479 Other lineage4.2.1.1 None
SRR14807560 HR-TB lineage4.2.1.1 None
SRR14807502 Other lineage4.2.1.1 None
SRR14807496 Other lineage4.2.1.1 None
SRR14807531 Other lineage4.2.1.1 None
SRR14807599 Other lineage4.2.1.1 None
SRR14807598 Sensitive lineage4.2.1.1 None
SRR14807609 Other lineage4.2.1.1 None
SRR14807623 Sensitive lineage4.2.1.1 None
SRR16088133 HR-TB lineage4.2.1.1 None
SRR14807645 Sensitive lineage4.2.1.1 None
SRR14807663 MDR-TB lineage4.2.1.1;lineage2.2.1 None
SRR16088248 Sensitive lineage4.2.1.1 None
SRR16088231 Sensitive lineage4.2.1.1 None
SRR16088516 Sensitive lineage4.2.1.1 None
SRR16088311 Other lineage4.2.1.1 None
SRR16088525 Sensitive lineage4.2.1.1 None
SRR16088247 Sensitive lineage4.2.1.1 None
SRR16103902 Other lineage4.2.1.1 None
SRR24255973 Sensitive lineage4.2.1.1 None
ERR11050724 Sensitive lineage4.2.1.1 None
SRR18213957 Sensitive lineage4.2.1.1 None
SRR24256019 Sensitive lineage4.2.1.1;lineage2.2.1 None
SRR24256078 MDR-TB lineage4.2.1.1 None
SRR18714764 Sensitive lineage4.2.1.1 None
SRR18714758 Sensitive lineage4.2.1.1 None
SRR18714883 HR-TB lineage4.2.1.1 None
SRR18714778 Sensitive lineage4.2.1.1 None
SRR18714838 Sensitive lineage4.2.1.1 None
SRR18714809 Sensitive lineage4.2.1.1 None
SRR18714822 Sensitive lineage4.2.1.1 None
SRR18714930 MDR-TB lineage4.2.1.1 None
SRR18714966 Sensitive lineage4.2.1.1 None
SRR18714938 Sensitive lineage4.2.1.1 None
SRR18714951 Sensitive lineage4.2.1.1 None
SRR18714971 Pre-XDR-TB lineage4.2.1.1 None
SRR18714960 Pre-XDR-TB lineage4.2.1.1 None
SRR18714991 Sensitive lineage4.2.1.1 None
SRR18714998 HR-TB lineage4.2.1.1 None
SRR18715118 Pre-XDR-TB lineage4.2.1.1 None
SRR18715001 Sensitive lineage4.2.1.1 None
SRR18715016 Sensitive lineage4.2.1.1 None
SRR18715041 Pre-XDR-TB lineage4.2.1.1 None
SRR18715071 Pre-XDR-TB lineage4.2.1.1 None
SRR18715128 Sensitive lineage4.2.1.1 None
SRR18715173 Sensitive lineage4.2.1.1 None
SRR18715154 Sensitive lineage4.2.1.1 None
SRR18715298 Sensitive lineage4.2.1.1 None
SRR18715185 HR-TB lineage4.2.1.1;lineage2.2.1 None
SRR18715237 Sensitive lineage4.2.1.1 None
SRR18715236 Sensitive lineage4.2.1.1 None
SRR18715324 HR-TB lineage4.2.1.1 None
SRR18715301 Sensitive lineage4.2.1.1 None
SRR18715327 Sensitive lineage4.2.1.1 None
SRR18715410 Sensitive lineage4.2.1.1 None
SRR18715336 MDR-TB lineage4.2.1.1 None
SRR18715378 Sensitive lineage4.2.1.1 None
SRR18715475 Other lineage4.2.1.1 None
SRR18715444 Sensitive lineage4.2.1.1 None
SRR18715474 Other lineage4.2.1.1 None
SRR18715454 Sensitive lineage4.2.1.1 None
SRR18715466 Sensitive lineage4.2.1.1 None
SRR18897176 Other lineage4.2.1.1 None
SRR18715480 Sensitive lineage4.2.1.1;lineage2.2.1 None
SRR18715476 Sensitive lineage4.2.1.1 None
SRR25395665 Sensitive lineage4.2.1.1 None
SRR24710182 Sensitive lineage4.2.1.1 None
SRR19304100 Sensitive lineage4.2.1.1 None
SRR19304112 Sensitive lineage4.2.1.1 None
SRR24673496 Sensitive lineage4.2.1.1 None
SRR24673497 Sensitive lineage4.2.1.1 None
ERR11068642 MDR-TB lineage4.2.1.1 None
SRR21675602 Sensitive lineage4.2.1.1 None
SRR22048502 Sensitive lineage4.2.1.1 None
ERR11068066 Sensitive lineage4.2.1.1 None
ERR11068198 Sensitive lineage4.2.1.1 None
ERR11067665 Sensitive lineage4.2.1.1 None
SRR22048437 Sensitive lineage4.2.1.1 None
ERR11067756 Other lineage4.2.1.1 None
ERR11068053 Sensitive lineage4.2.1.1 None
ERR11068123 Sensitive lineage4.2.1.1 None
ERR11068535 Pre-XDR-TB lineage4.2.1.1;lineage2.2 None
ERR11068705 Pre-XDR-TB lineage4.2.1.1 None
ERR11080875 MDR-TB lineage4.2.1.1 None
ERR11080862 MDR-TB lineage4.2.1.1 None
ERR11068815 Sensitive lineage4.2.1.1 None
ERR11082302 MDR-TB lineage4.2.1.1 None
ERR11080995 MDR-TB lineage4.3.3;lineage4.2.1.1 None
ERR11081017 Sensitive lineage4.2.1.1 None
ERR11081109 Sensitive lineage4.2.1.1 None
ERR11082040 Sensitive lineage4.2.1.1 None
ERR11082156 MDR-TB lineage4.2.1.1 None
ERR11081408 Sensitive lineage4.2.1.1 None
ERR11082279 MDR-TB lineage4.2.1.1 None
ERR11082323 Sensitive lineage4.2.1.1 None
ERR11082776 Sensitive lineage4.2.1.1 None
ERR11082429 MDR-TB lineage4.2.1.1 None
ERR11082893 MDR-TB lineage4.2.1.1 None
SRR23861722 Sensitive lineage4.2.1.1 None
ERR11083126 Sensitive lineage4.2.1.1 None
ERR11083040 Sensitive lineage4.2.1.1 None
ERR11083104 Sensitive lineage4.2.1.1 None
SRR23861848 Sensitive lineage4.2.1.1 None
SRR23861720 Sensitive lineage4.2.1.1 None
SRR23861835 Sensitive lineage4.2.1.1 None
SRR23861742 RR-TB lineage4.2.1.1 None
SRR23861757 Sensitive lineage4.2.1.1 None
SRR23861791 Sensitive lineage4.2.1.1 None
SRR23861992 Sensitive lineage4.2.1.1 None
SRR23861880 Sensitive lineage4.2.1.1 None
SRR23861894 RR-TB lineage4.2.1.1 None
SRR23861886 Sensitive lineage4.2.1.1 None
SRR23861940 Sensitive lineage4.2.1.1 None
SRR23861985 Sensitive lineage4.2.1.1 None
SRR23862012 Sensitive lineage4.2.1.1 None
SRR23862008 Sensitive lineage4.2.1.1 None
SRR23862034 Sensitive lineage4.2.1.1 None
SRR23862006 RR-TB lineage4.2.1.1 None
SRR23862036 Sensitive lineage4.2.1.1 None
SRR23862015 Sensitive lineage4.2.1.1 None
SRR23862073 Sensitive lineage4.2.1.1 None
SRR23862048 Sensitive lineage4.2.1.1 None
SRR23862074 Sensitive lineage4.2.1.1 None
SRR23862162 Sensitive lineage4.2.1.1 None
SRR23861721 Sensitive lineage4.2.1.1 None
SRR23862173 Sensitive lineage4.2.1.1 None
SRR23938649 Sensitive lineage4.2.1.1 None
SRR23938610 Other lineage4.2.1.1 None
SRR23861976 Sensitive lineage4.2.1.1 None
ERR11243465 Sensitive lineage4.2.1.1 None
ERR11243464 Sensitive lineage4.2.1.1 None
ERR11243472 Sensitive lineage4.2.1.1 None
ERR11243484 Other lineage4.2.1.1 None
ERR11243485 Sensitive lineage4.2.1.1 None
ERR11243490 Sensitive lineage4.2.1.1 None
ERR11243631 Sensitive lineage4.2.1.1 None
ERR11243491 Sensitive lineage4.2.1.1 None
ERR11243519 Sensitive lineage4.2.1.1 None
ERR11243596 Sensitive lineage4.2.1.1 None
ERR11243617 Sensitive lineage4.2.1.1 None
ERR11243514 Sensitive lineage4.2.1.1 None
ERR11243515 Sensitive lineage4.2.1.1 None
ERR11243589 Sensitive lineage4.2.1.1 None
SRR24255929 Sensitive lineage4.2.1.1 None
SRR21798478 Other lineage4.2.1.1 None
SRR24255930 Sensitive lineage4.2.1.1 None
SRR24255963 Pre-XDR-TB lineage4.2.1.1 None
SRR24673530 Sensitive lineage4.2.1.1 None
SRR24256334 MDR-TB lineage4.2.1.1 None
SRR24673584 Sensitive lineage4.2.1.1 None
ERR12545825 Sensitive lineage4.2.1.1 None
ERR12544390 Sensitive lineage4.2.1.1 None
ERR12544262 Sensitive lineage4.2.1.1 None
SRR28239465 Sensitive lineage4.2.1.1 None
SRR27449982 Sensitive lineage4.2.1.1 None
ERR12554796 Sensitive lineage4.2.1.1 None
SRR24673551 Sensitive lineage4.2.1.1 None
SRR24710268 Sensitive lineage4.2.1.1 None
SRR28239489 Sensitive lineage4.2.1.1 None
SRR25395651 Sensitive lineage4.2.1.1 None
ERR12549653 Sensitive lineage4.2.1.1 None
SRR28239467 Sensitive lineage4.2.1.1 None
SRR28239469 Sensitive lineage4.2.1.1 None
SRR28239665 Sensitive lineage4.2.1.1 None
SRR28239669 HR-TB lineage4.2.1.1 None
SRR28240122 Other lineage4.2.1.1 None
SRR28239726 Sensitive lineage4.2.1.1 None
SRR28239894 Sensitive lineage4.2.1.1 None
SRR24222927 Sensitive lineage4.2.1.1 None
SRR28240173 Sensitive lineage4.2.1.1 None
SRR28240249 Sensitive lineage4.2.1.1 None
SRR24255983 MDR-TB lineage4.2.1.1 None
ERR552959 Sensitive lineage4.2.1.1 None
SRR24256185 Pre-XDR-TB lineage4.2.1.1 None
SRR24256198 Pre-XDR-TB lineage4.2.1.1 None
SRR3085286 Sensitive lineage4.2.1.1 None
ERR2200027 Sensitive lineage4.2.1.1 de
SRR3085317 MDR-TB lineage4.2.1.1 None
SRR6044803 Sensitive lineage4.2.1.1 gb
SRR3086363 Sensitive lineage4.2.1.1 None
ERR2027252 Other lineage4.8;lineage4.2.1.1 None
ERR2199861 Sensitive lineage4.2.1.1 de
ERR4817313 HR-TB lineage4.2.1.1 None
SRR5709752 Pre-XDR-TB lineage4.2.1.1 th
SRR5710017 Pre-XDR-TB lineage4.2.1.1 th
ERR4816108 Sensitive lineage4.2.1.1 None
SAMN02419605 Sensitive lineage4.2.1.1 by
ERR4816240 Sensitive lineage4.2.1.1 None
SRR3743482 Other lineage4.2.1.1 None
SAMN02419601 Sensitive lineage4.2.1.1 by
SRR6079916 Sensitive lineage4.2.1.1 au
SAMN02419648 Sensitive lineage4.2.1.1 by
SAMEA4791118 Sensitive lineage4.2.1.1 de
ERR234567 HR-TB lineage4.2.1.1;lineage2.2.1 None
ERR234626 MDR-TB lineage4.2.1.1;lineage2.2.1 None
SRR6257086 MDR-TB lineage4.2.1.1 ru
SAMN02419632 Sensitive lineage4.2.1.1 by
SAMN02419642 Sensitive lineage4.2.1.1 by
ERR190379 Sensitive lineage4.3.4.2.1;lineage1.1.2 mw
ERR4815811 HR-TB lineage4.2.1.1 None
ERR137196 MDR-TB lineage4.2.1.1 ru
ERR3275381 Sensitive lineage4.2.1.1 nl
ERR3275180 Sensitive lineage4.2.1.1 nl
ERR4818954 HR-TB lineage4.2.1.1 None
ERR3275192 Sensitive lineage4.2.1.1 nl
ERR067597 Sensitive lineage4.2.1.1 ru
ERR551761 Sensitive lineage4.2.1.1 de
SAMN02419619 Sensitive lineage4.2.1.1 by
SRR5153811 MDR-TB lineage4.2.1.1 None
SRR5153880 Other lineage4.2.1.1 None
SRR5153881 Other lineage4.2.1.1 None
ERR553137 Sensitive lineage4.2.1.1 de
SRR2100949 Sensitive lineage1.1.2 None
SRR2100966 Sensitive lineage4.2.1.1 None
ERR552006 Sensitive lineage4.2.1.1 de
SRR5153219 MDR-TB lineage4.2.1.1 None
SRR5153257 MDR-TB lineage4.2.1.1 None
ERR551318 Sensitive lineage4.2.1.1 None
ERR11049688 Sensitive lineage4.2.1.1 None
SRR5153316 MDR-TB lineage4.2.1.1 None
ERR133943 HR-TB lineage4.2.1.1 ru
SRR5153920 Pre-XDR-TB lineage4.2.1.1 None
SRR2101014 Sensitive lineage1.1.2 None
SAMN02419623 Sensitive lineage4.2.1.1 by
ERR551213 Sensitive lineage4.2.1.1 de
SAMN02584662 MDR-TB lineage4.2.1.1 md
ERR551157 Sensitive lineage4.2.1.1 de
SAMN02584659 Other lineage4.2.1.1 md
ERR067657 MDR-TB lineage4.2.1.1 ru
SAMN02584664 Sensitive lineage4.2.1.1 md
SAMN02584667 Other lineage4.2.1.1 md
ERR234177 Sensitive lineage4.2.1.1 de
ERR2704694 Sensitive lineage4.2.1.1 None
ERR133858 MDR-TB lineage4.2.1.1 ru
ERR2652987 Sensitive lineage4.3.3 None
SRR23339966 Sensitive lineage4.2.1.1 None
ERR2704709 Sensitive lineage4.2.1.1 None
SRR23310915 Sensitive lineage4.2.1.1 None
SRR23310988 MDR-TB lineage4.2.1.1 None
SRR23339946 Sensitive lineage4.2.1.1 None
SRR23339969 Sensitive lineage4.2.1.1 None
SRR23340031 Pre-XDR-TB lineage4.2.1.1 None
SRR23339984 Sensitive lineage4.2.1.1 None
SRR23340051 Sensitive lineage4.2.1.1 None
SRR23340030 Pre-XDR-TB lineage4.2.1.1 None
SRR23340038 Pre-XDR-TB lineage4.2.1.1 None
SRR23340102 MDR-TB lineage4.2.1.1 None
SRR23340060 MDR-TB lineage4.2.1.1 None
SRR23340066 MDR-TB lineage4.2.1.1 None
SRR23340068 MDR-TB lineage4.2.1.1 None
ERR552958 Sensitive lineage4.2.1.1 cg
SRR23340111 Sensitive lineage4.2.1.1 None
SRR23340127 Sensitive lineage4.2.1.1 None
SRR23340128 Sensitive lineage4.2.1.1 None
SRR23340130 Sensitive lineage4.2.1.1 None
ERR278568 Sensitive lineage1.1.2 None
ERR551317 Sensitive lineage4.2.1.1 cg
ERR551531 Sensitive lineage4.2.1.1 cg
ERR551530 Sensitive lineage4.2.1.1 cg
ERR4827878 Sensitive lineage4.2.1.1 None
ERR2446368 Sensitive lineage4.2.1.1 nl
ERR2446340 Sensitive lineage4.2.1.1 nl
ERR4827717 Sensitive lineage4.7;lineage4.2.1.1 None
ERR2446127 Sensitive lineage4.2.1.1 nl
ERR4827771 Sensitive lineage4.2.1.1 None
ERR4827508 Sensitive lineage4.2.1.1 None
ERR4827846 Sensitive lineage4.2.1.1 None
ERR4827853 Sensitive lineage4.2.1.1 None
SRR6045052 HR-TB lineage4.2.1.1 None
SRR6046130 HR-TB lineage4.7;lineage4.2.1.1 None
ERR4822641 Sensitive lineage4.2.1.1 de
ERR2179797 Sensitive lineage4.2.1.1 cn
ERR2516811 MDR-TB lineage4.2.1.1 gb
ERR4830153 Sensitive lineage4.2.1.1 None
ERR2516379 Sensitive lineage4.2.1.1 be
ERR2516347 MDR-TB lineage4.2.1.1 be
SRR6484981 HR-TB lineage4.2.1.1 None
ERR2517029 MDR-TB lineage4.2.1.1 gb
ERR2516473 MDR-TB lineage4.2.1.1 nl
ERR4822409 Sensitive lineage4.2.1.1 ua
ERR2517161 Sensitive lineage4.2.1.1 nl
ERR2517366 Sensitive lineage4.2.1.1 nl
ERR4828777 MDR-TB lineage4.2.1.1 None
ERR2516535 MDR-TB lineage4.2.1.1 nl
ERR278595 Sensitive lineage4.2.1.1 None
ERR4828035 Sensitive lineage4.2.1.1 None
SRR6485022 Pre-XDR-TB lineage4.2.1.1 None
SRR6484990 Sensitive lineage4.2.1.1 None
SRR6356949 HR-TB lineage4.2.1.1 None
SRR6485058 Sensitive lineage4.2.1.1 None
SRR6458459 Sensitive lineage4.2.1.1 None
SRR6485070 Sensitive lineage4.2.1.1 None
SRR6485068 Sensitive lineage4.2.1.1 None
SRR6256995 HR-TB lineage4.2.1.1 None
SRR6485111 Sensitive lineage4.2.1.1 None
SRR6485165 MDR-TB lineage4.2.1.1 None
ERR4797839 Sensitive lineage4.2.1.1 in
SRR6257039 Sensitive lineage4.2.1.1 None
SRR6484986 Sensitive lineage4.2.1.1 None
SRR6257063 HR-TB lineage4.2.1.1 None
SRR6257060 Sensitive lineage4.2.1.1 None
ERR4830588 Sensitive lineage4.2.1.1 tm
ERR2510882 Pre-XDR-TB lineage4.2.1.1 it
ERR4828948 Sensitive lineage4.2.1.1 it
ERR4814795 Sensitive lineage4.2.1.1 gb
ERR4817730 Sensitive lineage4.2.1.1 gb
ERR2987810 Sensitive lineage4.2.1.1 None
SRR6831820 Sensitive lineage4.2.1.1 None
ERR294212 Sensitive lineage1.1.2 None
ERR4815129 HR-TB lineage4.2.1.1 gb
ERR5917676 HR-TB lineage4.2.1.1 by
ERR4817736 Sensitive lineage4.2.1.1 gb
ERR484734 HR-TB lineage4.2.1.1 None
ERR4815028 Sensitive lineage4.2.1.1 gb
ERR5917689 Sensitive lineage4.2.1.1 by
SRR6831813 HR-TB lineage4.2.1.1 None
ERR2503500 Sensitive lineage4.2.1.1 fi
SRR6831839 Sensitive lineage4.2.1.1 None
SRR6831850 Sensitive lineage4.2.1.1 None
SRR6831856 HR-TB lineage4.2.1.1 None
SRR6831834 Sensitive lineage4.2.1.1 None
ERR2503565 Sensitive lineage4.2.1.1 fi
ERR2503531 Sensitive lineage4.2.1.1 fi
SRR6831900 Sensitive lineage4.2.1.1 None
SRR6831879 Sensitive lineage4.2.1.1 None
ERR2503530 Sensitive lineage4.2.1.1 fi
SRR6831914 HR-TB lineage4.2.1.1 None
SRR6785172 Sensitive lineage4.2.1.1 None
SRR6831917 HR-TB lineage4.2.1.1 None
SRR6831921 MDR-TB lineage4.2.1.1 None
SRR6831990 Sensitive lineage4.2.1.1 None
SRR6785147 Other lineage4.2.1.1 None
SRR6831938 Sensitive lineage4.2.1.1 None
SRR6832019 MDR-TB lineage4.2.1.1 None
SRR6832043 Sensitive lineage4.2.1.1 None
SRR6785183 Sensitive lineage4.2.1.1 None
SRR6832073 HR-TB lineage4.2.1.1 None
SRR6832053 Sensitive lineage4.2.1.1 None
SRR6832046 Pre-XDR-TB lineage4.2.1.1 None
SRR6785261 HR-TB lineage4.2.1.1 None
SRR6785231 Sensitive lineage4.2.1.1 None
SRR6785291 Sensitive lineage4.2.1.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR6832142 HR-TB lineage4.2.1.1 None
SRR6832167 Sensitive lineage4.2.1.1 None
SRR6785376 Sensitive lineage4.2.1.1 None
SRR6785340 Sensitive lineage4.2.1.1 None
SRR6832197 MDR-TB lineage4.2.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6832205 Sensitive lineage4.2.1.1 None
SRR6832214 Other lineage4.2.1.1 None
SRR6832218 Sensitive lineage4.2.1.1 None
SRR6785398 HR-TB lineage4.2.1.1 None
SRR6785393 Sensitive lineage4.2.1.1 None
ERR11067351 Other lineage4.2.1.1 None
SRR6785389 HR-TB lineage4.2.1.1 None
SRR6785458 Sensitive lineage4.2.1.1 None
SRR6785433 MDR-TB lineage4.2.1.1 None
ERR11067352 Sensitive lineage4.2.1.1 None
SRR6832305 Sensitive lineage4.2.1 None
SRR6832283 Sensitive lineage4.2.1.1 None
SRR6832292 Sensitive lineage4.2.1.1 None
SRR6832301 MDR-TB lineage4.2.1.1 None
ERR11067353 Sensitive lineage4.2.1.1 None
SRR6832350 Sensitive lineage4.2.1.1 None
SRR6785507 Sensitive lineage4.2.1.1 None
SRR6832366 Other lineage4.2.1.1 None
SRR6832356 Sensitive lineage4.2.1.1 None
SRR6785533 Sensitive lineage4.2.1.1 None
SRR6832379 Pre-XDR-TB lineage4.2.1.1 None
SRR6785529 Sensitive lineage4.2.1.1 None
SRR6832511 Sensitive lineage4.2.1.1 None
SRR6832405 Sensitive lineage4.2.1.1 None
SRR6832425 Other lineage4.2.1.1 None
SRR6832453 HR-TB lineage4.2.1.1 None
SRR6832717 Sensitive lineage4.2.1.1 None
SRR6832510 HR-TB lineage4.2.1.1 None
SRR6832539 Sensitive lineage4.2.1.1 None
SRR6832548 MDR-TB lineage4.2.1.1 None
SRR6832597 Sensitive lineage4.2.1.1 None
SRR6930920 Sensitive lineage4.2.1.1 None
SRR6832685 Pre-XDR-TB lineage4.2.1.1 None
SRR6832594 MDR-TB lineage4.2.1.1 None
SRR6832684 MDR-TB lineage4.2.1.1 None
SRR6832786 Sensitive lineage4.2.1.1 None
SRR6832772 Sensitive lineage4.2.1.1 None
SRR6832719 Sensitive lineage4.2.1.1 None
SRR6832812 Pre-XDR-TB lineage4.2.1.1 None
SRR6832785 Pre-XDR-TB lineage4.2.1.1 None
SRR6807669 Other lineage4.2.1.1 None
SRR6832820 HR-TB lineage4.2.1.1 None
SRR6807670 Other lineage4.2.1.1 None
SRR6807726 Sensitive lineage4.2.1.1 None
SRR6831733 Sensitive lineage4.2.1.1 None
SRR6831714 Sensitive lineage4.2.1.1 None
SRR6807745 Sensitive lineage4.2.1.1 None
ERR5917752 MDR-TB lineage4.2.1.1 by
SRR6831748 Sensitive lineage4.2.1.1 None
ERR4817607 Sensitive lineage4.2.1.1 gb
ERR5917729 Sensitive lineage4.2.1.1 by
ERR5917693 Sensitive lineage4.2.1.1 by
ERR4815423 Sensitive lineage4.2.1.1 gb
ERR2987807 Sensitive lineage4.2.1.1 None
ERR2987806 Sensitive lineage4.2.1.1 None
ERR2987808 Sensitive lineage4.2.1.1 None
ERR2987811 Sensitive lineage4.2.1.1 None
ERR2987809 Sensitive lineage4.2.1.1 None
ERR3132254 HR-TB lineage4.2.1.1 None
SRR924715 Sensitive lineage4.2.1.1 None
SRR7131086 Sensitive lineage4.2.1.1 None
SRR958492 Sensitive lineage4.2.1.1 None
SRR7516417 Sensitive lineage4.2.1.1 None
SRR7516439 Pre-XDR-TB lineage4.2.1.1;lineage2.2.1 None
ERR11067583 HR-TB lineage4.2.1.1 None
SRR7645799 Other lineage4.2.1.1 None
SRR7645809 Other lineage4.2.1.1 None
SRR7645822 Sensitive lineage4.2.1.1 None
SRR7645827 Other lineage4.2.1.1 None
SRR7645848 Sensitive lineage4.2.1.1 None
SRR7645850 Other lineage4.2.1.1 None
SRR7645875 Other lineage4.2.1.1 None
SRR7645968 Other lineage4.2.1.1 None
SRR7646002 Sensitive lineage4.2.1.1 None
SRR7645997 Other lineage4.2.1.1 None
SRR7646042 HR-TB lineage4.2.1.1 None
SRR8649125 Sensitive lineage4.2.1.1 None
SRR7646050 Sensitive lineage4.2.1.1 None
SRR7646063 Sensitive lineage4.2.1.1 None
SRR7645792 Sensitive lineage4.2.1.1 None
SRR7645820 Other lineage4.2.1.1 None
SRR7645857 Sensitive lineage4.2.1.1 None
SRR7645930 Other lineage4.2.1.1 None
SRR7645961 Sensitive lineage4.2.1.1 None
SRR7645970 Other lineage4.2.1.1 None
SRR7645966 Other lineage4.2.1.1 None
SRR7646010 Sensitive lineage4.2.1.1 None
SRR7646029 HR-TB lineage4.2.1.1 None
SRR7646044 Sensitive lineage4.2.1.1 None
SRR7646056 Other lineage4.2.1.1 None