EBG00000313325 - n.580T>C
Drug resistance types
7 Sensitive
11 RR-TB
6 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage4.8 | 6 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2 | 3 |
| lineage3 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.1.2 | 1 |
| La2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1034791 | MDR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2516602 | MDR-TB | lineage4.3.2 | pe | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR2516441 | MDR-TB | lineage4.3.2 | pe | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR867575 | Other | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867574 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR28393644 | MDR-TB | lineage4.3.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR9786076 | Other | lineage3 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR216965 | Sensitive | lineage4.9 | None |
|---|
