EBG00000313339 - n.1246T>A
Drug resistance types
1 Sensitive
5 RR-TB
5 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage2.2 | 1 |
| lineage2.2.1 | 12 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.8 | 6 |
| lineage4.6.1.2 | 2 |
| La1.8.2 | 1 |
| lineage4 | 5 |
| lineage1.2.1.2.1 | 4 |
| lineage4.1.2 | 1 |
| lineage4.9 | 18 |
| lineage4.3.4.2.1 | 4 |
| La1.2 | 3 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.7 | 2 |
| 2 | |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6896539 | MDR-TB | lineage3 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7645827 | Other | lineage4.2.1.1 | None | ERR036215 | Other | lineage4.8 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR1023527 | RR-TB | lineage4 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR473337 | Other | lineage4.1.2 | None | ERR4769429 | Other | lineage4.9 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | ERR6201802 | Other | La1.2 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | ERR6198389 | Other | La1.2 | None | ERR6201800 | Other | La1.2 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1172359 | Pre-XDR-TB | lineage4.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1173025 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR13861499 | Other | lineage4.9 | None | SRR1791940 | Other | La1.8.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | ERR2229780 | Other | lineage4.9 | None | SRR21728710 | Other | lineage4.1.1.3 | None | ERR2229031 | Other | lineage4.9 | None | ERR2229554 | Other | lineage4.8 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21728339 | Other | lineage3 | None | ERR2229033 | Other | lineage4.8 | None | ERR176470 | Other | lineage4.3.4.1 | mw | ERR2229336 | Other | lineage4.8 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2229358 | Other | lineage4.8 | None | SRR6045036 | Other | lineage4;lineage3 | None | ERR2228888 | Other | lineage4.8 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6045332 | Other | lineage4.9 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | SRR6046015 | Other | lineage4.9 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6153036 | Other | None | SRR6397642 | RR-TB | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR6397770 | Other | lineage4.7 | None |
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