EBG00000313339 - n.2867_2868delCAinsT
Drug resistance types
1 Sensitive
2 RR-TB
2 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| La1.8.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.9 | 4 |
| lineage3 | 3 |
| lineage4.1 | 1 |
| lineage4.3.3 | 2 |
| lineage3.1.2.1 | 2 |
| La1.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR7617847 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR21658550 | Other | lineage1.1.1 | None | ERR4816417 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4821519 | Other | lineage3 | gb | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None |
|---|
