Rv0001 - c.600T>G
Drug resistance types
5 Sensitive
2 RR-TB
20 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1 | 3 |
| lineage2.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9 | 14 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.9;lineage9 | 1 |
| La3 | 2 |
| lineage3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
| 4 | |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818347 | Other | lineage4.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR1172817 | Other | La3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1172951 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173355 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR212033 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR20632814 | Sensitive | lineage4.9 | None |
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