lineage | Count |
---|---|
lineage4.9 | 11 |
lineage2.2.1 | 12 |
La2 | 1 |
lineage3 | 13 |
lineage4.3.3 | 4 |
lineage4.8 | 1 |
lineage2.2.2 | 1 |
lineage1.2.1.2 | 1 |
lineage4.1.2.1 | 3 |
lineage3.1.1 | 2 |
2 | |
lineage1.1.3 | 1 |
lineage3.1 | 1 |
lineage3.1.2.1 | 1 |
lineage1 | 1 |
lineage4.1.1 | 1 |
lineage6 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.7 | 1 |
lineage4.3.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.4.1.2 | 1 |
La1.3 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR6197040 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR16962458 | Sensitive | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675230 | RR-TB | lineage3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4815994 | Other | lineage3 | gb | ERR4817464 | Other | lineage3.1.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2512986 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818355 | Other | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4821011 | Other | lineage6 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4820324 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514854 | Other | lineage4.3.3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4821761 | Other | lineage3 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6046729 | Other | None | SRR6832644 | Other | lineage4.3.3 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None |
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