Rv0676c - c.2479_2481delCTGinsAC

Drug resistance types
3 Sensitive 2 RR-TB 26 HR-TB 24 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
4
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 3
lineage2.1;lineage4.9;lineage6.3 4
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.9 6
La3;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.9 21
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage2.2.1 2
La1;lineage4.9 1
lineage4 1
lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage6.3 2
La3 1
lineage2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
La1.8.1 1
lineage2.2 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1.1 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 88
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184381 MDR-TB None
SRR25827682 Other None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6046259 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR28119805 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR3283030 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR751326 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR5341453 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR137286 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046485 Other lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR20970016 Other lineage2.2 None