lineage | Count |
---|---|
lineage4.3.2 | 1 |
lineage4.9 | 2 |
La3 | 1 |
lineage2.2.1 | 1 |
63 | |
lineage4.1.2.1 | 3 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 1 |
lineage2.2 | 1 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
La1.8.1 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR1169249 | Other | La3 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR8976043 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR12416824 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | SRR5341333 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | ERR294266 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR5311099 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323043 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR3797043 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736848 | HR-TB | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None |
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