lineage | Count |
---|---|
lineage4.1.2.1 | 4 |
lineage4.9 | 4 |
lineage2.2.1 | 3 |
56 | |
La1.8.1 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.1.1 | 1 |
lineage4 | 2 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage4;lineage3.1 | 1 |
lineage4.3.3 | 2 |
lineage4.3.2 | 1 |
lineage2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13861720 | Other | lineage4.9 | None | ERR8025598 | Pre-XDR-TB | lineage2.2.1 | None | SRR1640750 | HR-TB | None | ERR9806955 | Pre-XDR-TB | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR176751 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675383 | HR-TB | None | SRR3675234 | Other | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR2693230 | Other | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2693239 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2693231 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323038 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3468544 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4798406 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358991 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None |
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