lineage | Count |
---|---|
87 | |
La1 | 1 |
lineage4 | 3 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 5 |
lineage3.1 | 2 |
lineage4.3.3 | 1 |
lineage2 | 1 |
lineage2.2 | 3 |
lineage4.1 | 1 |
lineage4.9 | 2 |
La2 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797044 | Other | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1173778 | Other | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR17040823 | MDR-TB | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR16370229 | Sensitive | lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR19224232 | Sensitive | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675221 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675222 | Other | None | SRR3675234 | Other | None | ERR212001 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675501 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | SRR3742665 | HR-TB | None | SRR5341418 | Other | None | ERR2693254 | Other | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR6045952 | HR-TB | None | ERR2693257 | Other | None | SRR6045233 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6045264 | Sensitive | lineage2.2.1 | None | ERR278594 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | SRR6325444 | HR-TB | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None |
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