EBG00000313325 - n.1110delC
Drug resistance types
12 Sensitive
15 RR-TB
6 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| lineage4.9 | 11 |
| lineage2.2.1 | 9 |
| lineage4.4.1.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.8 | 25 |
| lineage4.2.1 | 1 |
| lineage4 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage4.6.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 73 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828879 | MDR-TB | lineage3 | None | SRR6044890 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4815816 | Other | lineage4.5 | gb | SRR7517755 | HR-TB | lineage1.2.1.2.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR5864713 | MDR-TB | lineage2.2.1 | None | ERR017777 | Pre-XDR-TB | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR4407539 | Other | lineage4.1.2.1 | None | ERR4423526 | MDR-TB | lineage2.2.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR1173766 | Sensitive | lineage4.9 | None | ERR6052082 | MDR-TB | lineage2.2.1 | None | ERR6052117 | MDR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4815158 | Sensitive | lineage4.9 | None | SRR3085326 | Sensitive | lineage4.8 | None | SRR3082067 | Sensitive | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815491 | Sensitive | lineage3 | None | ERR2229810 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR4815957 | HR-TB | lineage4.2.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816781 | Sensitive | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817301 | Other | lineage4.9 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818224 | Sensitive | lineage4.4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818288 | HR-TB | lineage3 | None | ERR4818394 | Other | lineage4.9 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6152980 | HR-TB | lineage4.8 | ca | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None |
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