EBG00000313325 - n.754G>A
Drug resistance types
26 Sensitive
1 RR-TB
48 HR-TB
25 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 1 |
| lineage3 | 13 |
| lineage4.9.1 | 1 |
| lineage4.9 | 14 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 30 |
| lineage2.2.2 | 15 |
| lineage3.1.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.8 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.6.3 | 1 |
| lineage1.1.1.1 | 1 |
| La1.8.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.6 | 2 |
| lineage4 | 4 |
| lineage6.1.1 | 1 |
| lineage6.2.2 | 2 |
| lineage4.5 | 2 |
| La1.3 | 6 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage5.1.3 | 1 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage4.2.2.1 | 2 |
| lineage2.2 | 16 |
| 10 | |
| La1.6 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | SRR3675273 | Sensitive | lineage3 | None | ERR216928 | Other | lineage4.9.1 | None | SRR3675503 | Sensitive | lineage4.9 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675566 | Sensitive | lineage4.1.2.1 | None | ERR216901 | Other | lineage3.1.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515230 | Sensitive | lineage4.8 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR2446413 | Sensitive | lineage4.6.3 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR6153149 | Sensitive | lineage1.1.1.1 | ca | SRR5382721 | Other | La1.8.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR8599999 | Other | La1.8.1 | None | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | ERR1063855 | Other | lineage4 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR3801626 | Sensitive | lineage6.1.1 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR3797035 | Other | lineage4.9 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR400491 | Other | lineage4.5 | gb | ERR4188261 | Other | La1.8.1 | None | ERR4769514 | Other | La1.3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR473279 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769543 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR9119591 | MDR-TB | lineage4.6 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013617 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR10993953 | Other | La1.6 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048983 | HR-TB | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1173416 | Other | lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1173720 | Other | lineage4.9 | None | SRR11972331 | HR-TB | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR13199734 | Other | La1.2 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | SRR18213690 | Sensitive | lineage4.3.1.1 | None | SRR1657065 | Other | La1.8.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None |
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