EBG00000313325 - n.754G>A
Drug resistance types
22 Sensitive
1 RR-TB
14 HR-TB
7 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 8 |
| lineage6.1.1 | 1 |
| La1.3 | 5 |
| lineage3 | 6 |
| lineage2.2.1 | 12 |
| lineage4 | 1 |
| lineage4.9.1 | 1 |
| La1.2 | 2 |
| lineage2 | 1 |
| lineage4.1.2.1 | 2 |
| La1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage6.2.2 | 2 |
| La1.6 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage5.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180518 | Other | lineage4.9 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR3801626 | Sensitive | lineage6.1.1 | None | ERR4769408 | Other | La1.3 | None | SRR13180204 | Other | lineage3 | None | ERR3470682 | Other | lineage3 | None | ERR473279 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR216928 | Other | lineage4.9.1 | None | ERR4769478 | Other | La1.2 | None | SRR1049040 | HR-TB | lineage2 | None | SRR3675566 | Other | lineage4.1.2.1 | None | SRR1180083 | Sensitive | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR1183704 | Other | lineage4.9 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR1238558 | Other | lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | SRR2100532 | Sensitive | lineage3 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR228175 | Sensitive | lineage3 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR216901 | Other | lineage3.1.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | SRR8599999 | Other | La1.8.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1182889 | Other | lineage4.9 | None | SRR1183668 | Sensitive | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR4769555 | Sensitive | La1.3 | None | SRR10993953 | Other | La1.6 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | SRR1013583 | Sensitive | lineage2.2.2 | None | ERR1063855 | Other | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR751310 | Sensitive | lineage5.1.3 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183307 | Other | lineage4.9 | None | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR4769552 | Sensitive | La1.3 | None | SRR6153149 | Sensitive | lineage1.1.1.1 | ca | ERR4769512 | Sensitive | lineage4.9 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR400491 | Other | lineage4.5 | gb | SRR1013618 | RR-TB | lineage2.2.1;lineage4 | None |
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