EBG00000313325 - n.837_842delTTGGGAinsGGGAT
Drug resistance types
1 Sensitive
3 RR-TB
3 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.8 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage3 | 2 |
| lineage4.9 | 2 |
| lineage3.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045894 | Other | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4829208 | Other | lineage4.8 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4819734 | RR-TB | lineage3 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR6046398 | Sensitive | lineage4.1.1.3.1 | gb | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR4816562 | Other | lineage4.8 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4816182 | Other | lineage3.1.2.1 | gb | ERR4814745 | Other | lineage4.6.5 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045384 | Other | lineage4.1.2.1 | None |
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