EBG00000313325 - n.837_842delTTGGGAinsGGGAT


Drug resistance types
1 Sensitive 3 RR-TB 3 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.8 4
lineage4.1.2.1;lineage4.9 1
lineage4.1.1.1 2
lineage4.3.1.1 2
lineage3.1.2.1 1
lineage4.9 2
lineage1.2.1.2.1 1
lineage6.1.3 1
lineage3 2
lineage3.1.1 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1 8
lineage3.1.1;lineage4 1
lineage2.2.1;lineage4 1
lineage4.4.1.1 2
lineage4.6.5 1
lineage4.3.3 1
lineage4.1.1.3.1 1
lineage4.1.2.1 2
lineage4.1.1.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 40
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045894 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR6045553 Other lineage4.1.2.1;lineage4.9 None
ERR4816562 Other lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR7069193 Other lineage4.3.1.1 None
ERR4816182 Other lineage3.1.2.1 gb
SRR6044841 Other lineage4.9 None
ERR2514181 Other lineage1.2.1.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR11342646 HR-TB lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003042 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
SRR6046275 Other lineage3.1.1;lineage4 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR11349207 RR-TB lineage2.2.1 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR6044958 Other lineage4.4.1.1 None
SRR18002974 Other lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
ERR4819734 RR-TB lineage3 gb
ERR4814745 Other lineage4.6.5 None
SRR18002967 HR-TB lineage2.2.1 None
ERR9117812 Other lineage4.3.1.1 None
ERR10796597 Other lineage4.3.3 None
SRR18003032 Other lineage2.2.1 None
SRR6046398 Sensitive lineage4.1.1.3.1 gb
SRR6045384 Other lineage4.1.2.1 None
SRR6045464 Other lineage4.1.1.3 None
ERR4829208 Other lineage4.8 None
SRR7069082 Other lineage4.1.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6046343 Other lineage2.2.1 None
SRR6045778 Other lineage3.1 None
SRR6045778 Other lineage3.1 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None