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SRA data
EBG00000313325
- n.837_842delTTGGGAinsGGGAT
Drug resistance types
1 Sensitive
2 RR-TB
4 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
9
lineage4.8
4
lineage4.1.2.1
3
lineage4.4.1.1
2
lineage4.3.1.1
2
lineage4.1.1.1
2
lineage4.9
2
lineage6.1.3
1
lineage3
1
M.canetti;lineage2.1;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
40
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10796597
Other
lineage4.3.3
None
ERR2514181
Other
lineage1.2.1.2.1
None
ERR4814745
Other
lineage4.6.5
None
ERR4816562
Other
lineage4.8
None
ERR4829208
Other
lineage4.8
None
ERR867522
Pre-XDR-TB
lineage2.2.1
None
ERR867568
Other
lineage2.2.1;lineage4
None
ERR9117812
Other
lineage4.3.1.1
None
SRR11342646
HR-TB
lineage3
None
SRR11342651
MDR-TB
lineage4.1.1.1
None
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