EBG00000313339 - n.1096delA
Drug resistance types
15 Sensitive
23 RR-TB
7 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.9 | 13 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.1.2.1 | 4 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 22 |
| lineage4.3.3 | 4 |
| lineage3 | 5 |
| lineage4 | 5 |
| lineage6 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 4 |
| lineage4.1.2.1 | 7 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| 1 | |
| lineage4.2.2.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.6 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2 | 1 |
| La1.8.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972316 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18911462 | Sensitive | lineage1.2.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR21658372 | Sensitive | lineage1.2.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR2228965 | Other | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4815493 | Other | lineage3 | None | ERR2228810 | RR-TB | lineage4 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816632 | Sensitive | lineage2.2.1 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR4816846 | Other | lineage6 | gb | ERR2229147 | Other | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228910 | Other | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4817941 | Other | lineage4.8 | gb | SAMEA3450033 | Other | lineage4.8 | None | ERR4818003 | Other | lineage1.2.1.2.1 | gb | ERR4818076 | HR-TB | lineage4.6.2.2 | gb | ERR4819073 | Other | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5074294 | Sensitive | lineage4.4.1.1 | None | ERR2510729 | Pre-XDR-TB | lineage4.1.2.1 | it | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4819154 | Sensitive | lineage4.1.1.3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4819131 | Other | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4822051 | Sensitive | lineage4.3.3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821214 | RR-TB | None | ERR4822149 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | SRR6045263 | Sensitive | lineage4.9 | None | ERR4829917 | HR-TB | lineage4.7 | it | ERR4829503 | Sensitive | lineage4.8 | it | ERR4829224 | Sensitive | lineage4.1.2 | None | ERR4829183 | MDR-TB | lineage3.1.2 | it | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4830668 | MDR-TB | lineage4.1.2.1 | dz | ERR4829623 | Sensitive | lineage4.8 | None | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4828879 | MDR-TB | lineage3 | None | ERR4830701 | Other | lineage4;lineage3 | dz | ERR4828805 | Other | lineage4.6 | None | ERR4829769 | MDR-TB | lineage4.2.1 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397359 | Other | lineage4.3.2 | ca | ERR019855 | Other | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR5311092 | Other | La1.8.1 | None | SRR7131248 | Sensitive | lineage4.1.2 | None | SRR8649119 | Other | lineage4.6 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR8600288 | Other | La1.8.1 | None | SRR7829582 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR4407553 | Sensitive | lineage4.6.2.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR6359073 | Sensitive | lineage4.9 | None |
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