EBG00000313339 - n.1616T>A


Drug resistance types
1 Sensitive 8 RR-TB 35 HR-TB 24 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 15 Other
lineage Counts
lineage Count
lineage4.1.2.1 8
lineage2.1;lineage4.9 3
lineage1.2.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.9 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.1 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
1
La1.8.1 2
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 10
M.canetti;lineage2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage3 1
La1.7.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage4.6.4 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.2;La1.8.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.5 1
lineage4.1.2.1.1 1
spoligotype Counts
spoligotype Count
None 84
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28351488 MDR-TB lineage2.2.1 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2446118 Other lineage4.1.2.1 nl
SRR1640750 Other None
ERR3275196 Other lineage2.2.1 nl
ERR3797023 HR-TB La1.8.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1167055 Other lineage4.1.2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3077978 RR-TB lineage1.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675482 Other lineage4.9 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR13423544 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None