EBG00000313339 - n.2469C>T
Drug resistance types
28 Sensitive
11 RR-TB
11 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9 | 23 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.7 | 3 |
| lineage4.8 | 5 |
| lineage4.4.1.1 | 4 |
| lineage4.6.2.2 | 2 |
| lineage3.1 | 1 |
| lineage3 | 8 |
| lineage4.1.2 | 1 |
| 3 | |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 4 |
| lineage1.1.2 | 5 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2 | 1 |
| lineage4 | 7 |
| lineage2.2.1 | 12 |
| lineage4.3.4.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4 | 1 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 6 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.2 | 3 |
| La1.7.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | SRR3675491 | Other | lineage4.7 | None | ERR2229033 | Other | lineage4.8 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | ERR2027290 | RR-TB | lineage3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR4035710 | Sensitive | lineage4.1.2 | None | ERR245790 | Sensitive | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818766 | Other | lineage3 | gb | SRR5341430 | Other | lineage3 | None | SRR5341460 | Other | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821198 | Other | lineage3 | gb | ERR4821373 | HR-TB | lineage4.1.2.1 | None | ERR4822147 | Sensitive | lineage4.8 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6046210 | Other | lineage4 | None | SRR6045726 | Other | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046275 | Other | lineage3.1.1 | None | ERR2851371 | Other | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046743 | Other | lineage3 | None | ERR4829881 | MDR-TB | lineage1.1.2 | it | SRR6046646 | Other | lineage4.7 | gb | SRR6046739 | Other | lineage1.1.2 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982405 | Sensitive | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR5087855 | Other | La1.8.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | ERR5311080 | Other | La1.8.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796630 | HR-TB | None | ERR10796597 | Other | lineage4 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR4188010 | Other | La1.8.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4450956 | Other | La1.7.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR9117728 | Other | lineage3 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342379 | MDR-TB | lineage1.1.2 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184379 | Other | lineage4 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR13888750 | Other | La2 | None |
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