EBG00000313339 - n.2654G>T
Drug resistance types
10 Sensitive
18 RR-TB
6 HR-TB
5 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 2 |
| lineage4.8 | 9 |
| lineage4.1 | 2 |
| lineage3 | 10 |
| lineage4.1.3 | 1 |
| lineage2.2.1 | 12 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 13 |
| lineage5 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4 | 3 |
| lineage3.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9 | 9 |
| lineage1.1.2 | 2 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4 | 1 |
| La1.8.1 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675475 | Other | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR550846 | Sensitive | lineage3 | de | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814834 | Other | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4816967 | RR-TB | lineage5 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816147 | RR-TB | lineage2.2.1 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR4817189 | Other | lineage4.7 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816650 | Sensitive | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4818556 | Other | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819532 | HR-TB | lineage4.6.2.2 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820891 | Other | lineage4.9 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820001 | Other | lineage4.8 | gb | ERR2515032 | Other | lineage3 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4822085 | Other | lineage4.8 | gb | ERR4820194 | Other | La3 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821371 | Other | lineage4.8 | gb | SRR5818388 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046208 | Other | lineage4 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR4627382 | Other | La1.8.1 | None | ERR3806588 | Other | lineage6 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR4815104 | Other | lineage4.8 | None |
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