EBG00000313339 - n.2699C>G


Drug resistance types
33 Sensitive 0 RR-TB 57 HR-TB 31 MDR-TB 39 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
lineage4.9 17
lineage2.2.1.1 5
lineage3 10
La1.8.1 2
lineage4.5 3
lineage2.2.1 40
lineage4.3.3 1
lineage4.1.2.1 7
lineage4.2.1.1 1
lineage2.2 23
lineage4.4.2 5
lineage2.2.2 21
11
lineage4 5
lineage4.8 5
lineage4.8.1 3
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 3
lineage4.9;lineage2 1
lineage4.4 1
lineage4.2.2.1 1
lineage4.4.1.1 1
lineage4.4.1.2 1
lineage4.2.2 1
lineage4;lineage2.2.1 1
lineage4.6.2.2 1
lineage4.3.4.2.1 1
lineage4.6.5 1
spoligotype Counts
spoligotype Count
None 173
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693237 Other lineage4.9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR2517457 Sensitive lineage3 None
SRR5382721 Other La1.8.1 None
SAMN02360585 HR-TB lineage4.5 None
ERR4829238 Sensitive lineage3 None
ERR2446544 Sensitive lineage3 nl
SRR6046395 HR-TB lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
SRR6046609 Sensitive lineage4.9 None
ERR4832043 MDR-TB lineage2.2.1 None
ERR4832055 MDR-TB lineage2.2.1 None
ERR4831894 MDR-TB lineage2.2.1.1 None
SRR6785195 Sensitive lineage2.2.1 None
ERR4627326 Other La1.8.1 None
SRR7131160 Sensitive lineage3 None
ERR067664 Sensitive lineage4.3.3 None
ERR3283049 Sensitive lineage4.9 None
ERR3797084 Sensitive lineage4.9 None
ERR3283015 Sensitive lineage4.9 None
ERR4024770 Sensitive lineage4.1.2.1 None
ERR473279 Other lineage4.9 None
ERR5866078 MDR-TB lineage4.2.1.1 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
ERR5865379 Pre-XDR-TB lineage2.2.1 None
SRR1013553 Pre-XDR-TB lineage2.2 None
ERR6865787 Sensitive lineage4.1.2.1 None
ERR751317 Sensitive lineage4.9 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013598 HR-TB None
SRR1013596 HR-TB lineage3 None
SRR1013597 HR-TB lineage2.2 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013599 HR-TB None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013608 HR-TB lineage2.2 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013609 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013614 HR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013611 HR-TB lineage4 None
SRR1013612 HR-TB lineage4 None
SRR1013618 MDR-TB None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR10315476 MDR-TB lineage4.8 None
SRR1013633 MDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR10315473 MDR-TB lineage4.8.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR10315595 Pre-XDR-TB lineage2.2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048885 MDR-TB None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048980 HR-TB lineage3 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048982 HR-TB None
SRR1048988 HR-TB lineage2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048996 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1048994 HR-TB lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR11349180 MDR-TB lineage2.2.1 None
SRR1049023 HR-TB lineage2.2 None
SRR1049027 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049026 Pre-XDR-TB None
SRR1049041 MDR-TB None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR1172066 Sensitive lineage4.9 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1172713 MDR-TB lineage4.4 None
SRR12080291 MDR-TB lineage2.2.1 None
SRR1173720 Other lineage4.9 None
SRR1173416 Other lineage4.9 None
SRR15368707 HR-TB lineage2.2.2;lineage2.2.1 None
SRR15316299 Sensitive lineage2.2.1 None
SRR15368751 Sensitive lineage2.2.1 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR15368784 Sensitive lineage2.2.1.1 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR16100231 Sensitive lineage4 None
SRR17567930 Other lineage4.4.1.1 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR18003017 MDR-TB lineage4.2.2 None
SRR18002911 Sensitive lineage4;lineage2.2.1 None
SRR18002996 MDR-TB lineage2.2.2 None
SRR19303775 Other lineage3 None
SRR18511647 Sensitive lineage2.2.1 None
SRR19303792 Sensitive lineage4.1.2.1 None
SRR19303776 Other lineage4.1.2.1 None
SRR19303779 Sensitive lineage4.8 None
SRR19303773 Other lineage4.6.2.2 None
SRR19303788 Sensitive lineage4.8 None
SRR19303933 Other lineage4.8 None
SRR19303806 Sensitive lineage4.1.2.1 None
SRR19303813 HR-TB lineage4.8 None
SRR19304064 MDR-TB lineage2.2.1 None
ERR192070 Other None
SAMN02360583 HR-TB lineage2.2.2 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR3742667 Sensitive lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4818009 Sensitive lineage2.2.1.1 None
ERR4817292 Sensitive lineage4.3.4.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360577 HR-TB lineage3 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR3275548 Sensitive lineage3 nl
SAMN02360580 HR-TB lineage2.2.1 None
ERR4818444 Other lineage4.6.5 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR4819449 Sensitive lineage4.9 None
ERR4819430 Sensitive lineage4.1.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None