EBG00000313339 - n.377G>A
Drug resistance types
4 Sensitive
2 RR-TB
9 HR-TB
17 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9 | 5 |
| lineage4.3.4.2 | 3 |
| lineage4.3.2 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 6 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR16156817 | Other | lineage4.9 | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR3675502 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1181251 | Other | lineage2.2.1 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR10809074 | Sensitive | lineage4.9 | None | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR1035296 | HR-TB | lineage4.9 | br | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1213930 | Other | lineage4.3.2 | pe | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
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