Rv0005 - c.954G>A
Drug resistance types
21 Sensitive
0 RR-TB
13 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1;lineage4.9 | 2 |
| La3;lineage4.9 | 4 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176751 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR9125324 | Sensitive | lineage1.2.1.2.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR16058274 | Sensitive | lineage1.2.1.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR28868343 | Sensitive | lineage1.2.1.2.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None |
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