lineage | Count |
---|---|
La3 | 1 |
lineage2.2 | 2 |
74 | |
lineage4.9 | 4 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.6.5 | 1 |
lineage4 | 4 |
lineage4.1.2.1 | 3 |
lineage3.1 | 1 |
La2 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | SRR1169249 | Other | La3 | None | SRR1183049 | Other | lineage2.2 | None | SRR1169306 | Other | None | SRR12416824 | HR-TB | None | SRR13837521 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675234 | Other | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR234659 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR176751 | HR-TB | None | ERR4817024 | HR-TB | lineage4.6.5 | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693231 | Other | None | SRR6045327 | HR-TB | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6325442 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | ERR323041 | HR-TB | None | ERR3283024 | Other | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283025 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797061 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797014 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR6358979 | Other | None | ERR4188350 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786604 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786843 | Other | None |
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